Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00525 ATGGGAGAAATAGAAAGAAAGGCGATGTCATTAATTAGGTGGGAGAAGGAGGAAGAAGAAGAAGCACAAGCCCAAATGGATATCTGGAAGTACATATTTGGGTTTGTGGAACTGGCAGTGGTGAAATGTGCGATTGAGCTTGGCATAGCTGAAGCCATAGAGAAGCATGGGAGCCCCATGACACTATCGGAGATATCATCAACTCTAGGCTGCGATCCTTCACTTCTCAACCGCATCATGAGGTTCCTAGTGCACCGAAAGATATTCAAAGCCATACCCAGCGACGTGTGCACGGGGTATTCTCAAACAGCTCTGTCTCGGCGTTTGATGAGAAGCGGCGAACACAGCATGGCTGCTTTTCTCCTTCTGGAGAGCAGTCCTGTAATGCTGGCACCTTGGCACAGCCTGAGTGCTCGCGTCATGGACAATGACAAACCCTCATTTGCAAACGCTCACGGCCAAGACCTGTGGCGCTATGGTGCCGCAGATCTCGACCACAGCAACCTCTTCAATGAAGCAATGGCATGTGATGCCAAGATTGTTGTGCCTGTCATCATTCGAAGTTGCAGCGAGGCATTTGATGGCCTCAAGTCCTTGGTGGATGTGGGTGGGGGCAACGGCACCGCCATGCGCATCCTCGCTGAGGCTTGCCCTTGGATTCGAGCCATCAATTTTGATCTTCCTCATGTCATTGCCGATGCTCCTCAGTGCGATGCCGTCCAACATGTGCCAGGCGACATGTTTTTAAGTGTTCCTAATGCTTATGCTGCTTTTCTTATGTGGGTTTTGCACGATTGGTCAGACGAAGAGTGCATCCAAATCTTAAACAAGTGTAGGGAAGCCATTCCAAAGGAAAATGGAAGGGTTATTATTGTGGAGGCGGTGATTGAAGAAGAACATGCAGAAGAAAAAGGGTTGAAGGATGTAGGATTGATGCTTGACATGGTAATGATGGCGCACACTAACTTCGGCAAAGAGCGCACACTCAAAGAGTGGGAATATGTCATCAAAATGGCAGGATTTAGCGCATTCACTGTCAAACCCATTCATGCCGTGCAGTACGTGATTATGGCTTTCTACTAA 1083 0.4857 MGEIERKAMSLIRWEKEEEEEAQAQMDIWKYIFGFVELAVVKCAIELGIAEAIEKHGSPMTLSEISSTLGCDPSLLNRIMRFLVHRKIFKAIPSDVCTGYSQTALSRRLMRSGEHSMAAFLLLESSPVMLAPWHSLSARVMDNDKPSFANAHGQDLWRYGAADLDHSNLFNEAMACDAKIVVPVIIRSCSEAFDGLKSLVDVGGGNGTAMRILAEACPWIRAINFDLPHVIADAPQCDAVQHVPGDMFLSVPNAYAAFLMWVLHDWSDEECIQILNKCREAIPKENGRVIIVEAVIEEEHAEEKGLKDVGLMLDMVMMAHTNFGKERTLKEWEYVIKMAGFSAFTVKPIHAVQYVIMAFY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00525 360 Gene3D Vaccinia Virus protein VP39 111 359 IPR029063 -
Pumo11g00525 360 CDD AdoMet_MTases 199 292 - -
Pumo11g00525 360 FunFam O-methyltransferase family protein 13 109 - -
Pumo11g00525 360 Pfam Dimerisation domain 40 84 IPR012967 GO:0046983
Pumo11g00525 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 360 IPR016461 GO:0008168
Pumo11g00525 360 PANTHER O-METHYLTRANSFERASE 38 344 IPR016461 GO:0008168
Pumo11g00525 360 Gene3D - 12 109 IPR036388 -
Pumo11g00525 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Pumo11g00525 360 SUPERFAMILY "Winged helix" DNA-binding domain 18 112 IPR036390 -
Pumo11g00525 360 FunFam O-methyltransferase family protein 111 359 - -
Pumo11g00525 360 Pfam O-methyltransferase domain 133 342 IPR001077 GO:0008171
Pumo11g00525 360 PIRSF O-mtase 6 360 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00525 Pumo-Chr11 18820823 18822543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00525 41 346 Monolignol Biosynthesis Gene Families AT5G54160 36.392 9.00e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00525 K22588 - gmx:100782951 556.984