Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00509 ATGACCCACGTGGTGTTTATTGGTGAAGGTGGAAAAAAGACACGAATAACTGGCAACAAAAGCTTCATAGATGGAATTAATACTTACGGAACTGCCACTGTTGCTATTCAAGGAGATCACTTTGTGGCCATCAATTTGGGGTTTGAAAACTCTGTTGGACCTCAAAAGCATCAGGCAGTGGCATTGAGAGTGCAAGCAGACAAGTCCATCTTCTACAATTGCTCAATGGATGGGTATCAGGATACACTTTATGCACACACCATGTGTCAATTCTATAGAGATTGCACCATTTCAGGTACCATCGACTTTAGACAACAACCATCTGGAATAGTAATCCAAGGAGGATCCATTGTGTCTGACCCTGAGTTCTACTCAGTGAGATTTGATAACAAGGCCTACCTAGCTCGTCCATGGAAGAATTACTCTAGGACCATCATCATGGACACTTACATTGATTATTTGATTCATGCTGATGGGTATATGCCATGGCAAGGACTAGAGGGCCCTTTTGGTATGGATACTTGCTTTTATGCCGAGTACCACAACACTAGCCCCGGTTTAGACAAATCCAAGCGTGTCAATTGGGCTAGGATTTGGAACCTCAATTCAAAAGCTGCACATTGGTTTTCACCATCCAAGTTCTTTCATGGAACTGACTGGATTGAGGTTACTGGGATTCCTTGCTTCCTTGATGTGCCCATGCACCATAAGCACAAAAAGACTATACTTAATTGGTGA 738 0.4282 MTHVVFIGEGGKKTRITGNKSFIDGINTYGTATVAIQGDHFVAINLGFENSVGPQKHQAVALRVQADKSIFYNCSMDGYQDTLYAHTMCQFYRDCTISGTIDFRQQPSGIVIQGGSIVSDPEFYSVRFDNKAYLARPWKNYSRTIIMDTYIDYLIHADGYMPWQGLEGPFGMDTCFYAEYHNTSPGLDKSKRVNWARIWNLNSKAAHWFSPSKFFHGTDWIEVTGIPCFLDVPMHHKHKKTILNW 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00509 245 Gene3D - 105 232 IPR012334 -
Pumo11g00509 245 Gene3D - 1 104 IPR012334 -
Pumo11g00509 245 SUPERFAMILY Pectin lyase-like 2 229 IPR011050 -
Pumo11g00509 245 Pfam Pectinesterase 105 217 IPR000070 GO:0030599|GO:0042545
Pumo11g00509 245 Pfam Pectinesterase 1 103 IPR000070 GO:0030599|GO:0042545
Pumo11g00509 245 PANTHER PECTINESTERASE 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00509 Pumo-Chr11 18344587 18345867 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00509 1 227 Carbohydrate Esterase AT3G05610 47.510 3.66e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00509 K01051 - gmx:100803527 457.603