Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00502 ATGAAGGATTTGTTAACAACAAGAATGCATATGAGCAGTAATGCCCTTGCCATTGTAACCGAAATGGCTGACACTGTTAACGATTGGAATGTCACAAAATTACTTGGATGCCGCCTTCTTCAAGATTCTGAGCTTCCCTCATGGGTTGATCAACGTAGACTCCTTAATGCAAACACAACTCCATTCAAACACAAGCCTAATGTTGTTGTAGTCATAGATGGGAGCGGAGATTTCAAAAATATCAATGAGGCATTGAAGCAAGTGTCTGAGAAAAATCGAAAACCATTTGTGATCTACATCAAGGAAGGCGTTTACCAAGAGTATGTTGAAGTTACAAAGGAAATGACCCACGTGGTGTTTATTGGTGAAGGTGGAAAAAAGACACGAATAACTGGCAACAAAAGCTTCATAGATGGAATTAATACTTACGGAACTGCCACTGTTGCTATTCAAGGAGATCACTTTGTGGCCATCAATATGGGGTTTGAAAACTCTGTTGGACCTCAAAAGCATCAGGCAATGGCATTGAGAGTGCAAGCAGACAAGTCCATCTTCTACAATTGCTCAATGGATGGGTATCAGGATACACTTTATGCACACACCATGCGTCAATTCTATAGAGATTGCACCATTTCAGGTACCATCGACTTTGTGTTTGGTAATGCACTTGTTGTTTTTCAAAATTGTACTTTCGTTTTCCGAAAGTCACTGGAGAACCAACAATGCATTGCGACTACACAAGAATGA 747 0.4029 MKDLLTTRMHMSSNALAIVTEMADTVNDWNVTKLLGCRLLQDSELPSWVDQRRLLNANTTPFKHKPNVVVVIDGSGDFKNINEALKQVSEKNRKPFVIYIKEGVYQEYVEVTKEMTHVVFIGEGGKKTRITGNKSFIDGINTYGTATVAIQGDHFVAINMGFENSVGPQKHQAMALRVQADKSIFYNCSMDGYQDTLYAHTMRQFYRDCTISGTIDFVFGNALVVFQNCTFVFRKSLENQQCIATTQE 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00502 248 PANTHER PECTINESTERASE 5 247 - -
Pumo11g00502 248 Pfam Pectinesterase 67 247 IPR000070 GO:0030599|GO:0042545
Pumo11g00502 248 SUPERFAMILY Pectin lyase-like 65 247 IPR011050 -
Pumo11g00502 248 ProSitePatterns Pectinesterase signature 2. 211 220 IPR033131 -
Pumo11g00502 248 ProSitePatterns Pectinesterase signature 1. 92 111 IPR018040 -
Pumo11g00502 248 FunFam Putative pectinesterase 57 65 248 - -
Pumo11g00502 248 Gene3D - 18 248 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00502 Pumo-Chr11 18171979 18173165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00502 1 245 Carbohydrate Esterase AT3G05610 55.870 8.97e-93 285