Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00485 ATGGCTGGAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTTATTCTCCTAATTCTTCTTTTATCACAAAGAAAGATGGTGCTGACTCTACTGGCAGCAACTCCTTAAGAGTGCTTGCATTAATTGGAGCTGGTGTCTCAGGGTTTTTAGGTTTTACAACAACTGCGTTTGCTGATGAAGCTGAGCATGGCCTGGCATGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATCAAGAAGTCTGTGCTTCTTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTATACAGAAGAAGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCTTTCCTCAACCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTACCAAAGCTCGTCACAATGGTCAGAACTATGTGTTTGCACTTCTAACCGGTTATCGTGACCCTCCTGCTGGTGTTTCGATTAGAGAAGGACTGCACTATAATCCTTATTTTCCTGGTGGGGCCATTGCTATGCCTAAAATGCTTAATGATGGTGCTCTTGAATATGAAGATGGTACCCCTGCTACAGAAGCTCAGATGGGTAAAGATGTTGTATCATTCCTGACTTGGGCTGCAGAACCTGAGATGGAAGAGAGAAAACTGATGGGATTCAAATGGATATTTGTTCTATCACTGGCATTGCTTCAAGCTGCCTATTACCGCCGCCTACGGTGGTCTGTTCTGAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAG 912 0.4441 MAGGVIRQLFRRKLQSYSPNSSFITKKDGADSTGSNSLRVLALIGAGVSGFLGFTTTAFADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQEVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGALEYEDGTPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00485 303 Gene3D - 259 302 - -
Pumo11g00485 303 ProSiteProfiles Cytochrome c family profile. 86 193 IPR009056 GO:0009055|GO:0020037
Pumo11g00485 303 SUPERFAMILY Cytochrome c 67 257 IPR036909 GO:0009055|GO:0020037
Pumo11g00485 303 PRINTS Cytochrome C1 signature 219 238 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 PRINTS Cytochrome C1 signature 137 157 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 PRINTS Cytochrome C1 signature 72 91 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 PRINTS Cytochrome C1 signature 208 219 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 PRINTS Cytochrome C1 signature 92 111 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 PRINTS Cytochrome C1 signature 170 194 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 PRINTS Cytochrome C1 signature 258 273 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 PRINTS Cytochrome C1 signature 239 258 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 Gene3D - 63 258 IPR036909 GO:0009055|GO:0020037
Pumo11g00485 303 PANTHER CYTOCHROME C1 28 301 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 Pfam Cytochrome C1 family 74 290 IPR002326 GO:0009055|GO:0020037
Pumo11g00485 303 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 258 302 IPR021157 -
Pumo11g00485 303 FunFam Cytochrome c1, heme protein 63 258 - -
Pumo11g00485 303 FunFam Cytochrome c1, heme protein, mitochondrial 259 303 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00485 1 303 Chloroplast and Mitochondria Gene Families AT3G27240 83.987 4.82e-179 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00485 K00413 - gmx:100803087 590.882