Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00480 ATGATAAAGGGCGTGATGCTCACGCACCGCAACCTGACCGCCATCGCCGCAGGATACGACTCCGTTCGCGAGAAGAGAAAAGAGCCCGCGGTGGTGCTCTATACGGTGCCGTTTTTCCACGTGTACGGGTTCACGTTCAGCCTGGGGGCGATGGTGCTGTCGGAGACGGTGGTGGTCATGGAGAGGTTCAGTTTGGGGGCGATGCTGCGCGCCGTGGAGAGGTTCCGAGTGACGCACGTTACGGTGGTGCCGGCGCTGGTGGTGGCTGTGACGAAAGCCAGCGTCACCGACGTGTACGATTTGACGTCGCTCGAAGCGATCATTTGCGGTGGATCTCCGCTGAGGAAGGAAACCGACGAGGCTTTCAAAGCCAAGTTCCCCCACGTCCTCGTCATGCAGGTTTGTTTGTTTGCCTTCATAAACCATAATAGTAACAAATTTTGA 444 0.5698 MIKGVMLTHRNLTAIAAGYDSVREKRKEPAVVLYTVPFFHVYGFTFSLGAMVLSETVVVMERFSLGAMLRAVERFRVTHVTVVPALVVAVTKASVTDVYDLTSLEAIICGGSPLRKETDEAFKAKFPHVLVMQVCLFAFINHNSNKF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00480 147 Gene3D - 1 135 - -
Pumo11g00480 147 Pfam AMP-binding enzyme 3 129 IPR000873 -
Pumo11g00480 147 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 129 - -
Pumo11g00480 147 SUPERFAMILY Acetyl-CoA synthetase-like 3 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00480 Pumo-Chr11 17606730 17607173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00480 2 133 Monolignol Biosynthesis Gene Families AT5G63380 45.588 1.70e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00480 K01904 - gmx:100784234 218.779