Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00479 ATGTTTGCTTGTGCATCCGTATCTAATGGAAGCAAATGCAAAGACCAAGCATATACTCACCCGTCACAGATCCGAGAAGCGGTTTCAACCGCGATTCCAGAACCTTCCACAGCCTCAAGCCACCGCTCCGCCTCCCTCCTCCTCACGCCGCCAGTCTCCGCCACAGCCTTCGCCCTCTTCCTCCGCCGCAACTCGCCCTTTCCGGACTCCTCCACCGCCATTATCGACTCCGCCACCGGCCACCGCCTCTCCTACGGCGAGTTCATCCACCGCATCGAAACGCTAGCCTCGAACCTCACCACAGTCCTCAAACTCACCAAAGGCAACACCGCGCTCGTTCTCTCCCCAAACCTCATCCAAGTTCCGATCCTCTGCTTCGCGCTCCTCTCCCTCGGCGTGGTCGTCTCCCCCGCGAACCCTCTCTCCACGCGCTCCGAGCTCACGCGCTTCTTCAACATCAGCAAACCCGCGAATCGTGTTCACAGTAGCTTCAGTCGCTGA 501 0.5948 MFACASVSNGSKCKDQAYTHPSQIREAVSTAIPEPSTASSHRSASLLLTPPVSATAFALFLRRNSPFPDSSTAIIDSATGHRLSYGEFIHRIETLASNLTTVLKLTKGNTALVLSPNLIQVPILCFALLSLGVVVSPANPLSTRSELTRFFNISKPANRVHSSFSR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00479 166 SUPERFAMILY Acetyl-CoA synthetase-like 51 162 - -
Pumo11g00479 166 Gene3D - 42 163 IPR042099 -
Pumo11g00479 166 Pfam AMP-binding enzyme 67 156 IPR000873 -
Pumo11g00479 166 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 50 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00479 Pumo-Chr11 17605773 17606557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00479 51 156 Monolignol Biosynthesis Gene Families AT5G63380 38.596 1.34e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00479 K01904 - gmx:100784234 186.808