Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00472 ATGATGTTCCAAGCTGGTTCAATGAGACATTTTTGTTACCTTTATCTTGTGGTTCTTTCATGGTTTTTGTTCATCCCAAACACTCATGAATTACAAGCAGCTCAGACTCAAGCCTTGTTGCAGTTAAGAGTTTATCTGGAGTACCCCTCTTCTTTGCAAATTTGGGAAAATTACAATTGGGACCTATGCAGCCTTTCTCCCTCTGCAAACATGAGCATTAAATGTGAAGATGATGAGGTAACTGAGCTTAAAATTATGGGTGAAAAGTCTGAGAAGCCACCACGGTTCAATGGATTTGCAGTTCCTAATCAGACACTATCCATGAATTTCTCCATTGACTCCTTTTTCACCACTTTGACAAGGTTGACCAGCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATAAGATTCACAGTTTCTCTTTGCTTCAAGTTTTGGACTTGAGCTCCAATTTCTTATTTGGAGCAATCCCACCAAAGATATCCACAATGGTAAATCTTCATGCACTGACCCTTGATGATAATTATTTTAACACCATTATGCCTGATTGGTTAGATTCATTGTCTAATCTAAATATCTTGAGTGTGAAGAGCAATGGTTTAAAGGGTTCATTCCCCTCTTCACTATGCAAAATTAAGACACTTGAAGTGATTTCCTTGTCCCACAATGAGCTGTCTGGGGAATTGCCTGGTCTAAGTTCTCTCACTGGCCTACATGTTCTGGATTTAAGAGAAAACCATTTAGAATCTGAACTACCATTGTTGCCTAAATCAGTGGTCACAGTTCTGCTTAGCAATAATTCATTCTCAGGAGAGATACCTAAGCAGTTTGGTGAACTGGATCAGCTTCAACATCTTGATCTTTCTTCAAATCACCTCACTAAGACACCCCCACCTACCTTGTTTTCACTGCCAAAAGTAAGTTATTTGAATCTGGCAGGCAATGTGCTAAGTGGGGCCCTCCCAGACAAACTTAACTGTGGGAGCAAACTTGGGTTTGTGGACATTTCTAGTAACAAGTTAAGTGGTGGACTTCCTTCTTGCTTGGCCAATACTTCTGATGGTAGAGTTGTCAGATATGCTGGAAACTGTTTATCTGTTGATTCTCAGAACCAGCATAGAGGGTCTTATTGTAGAGAATCTAGCACTGGATGGAAGATCTTTAAGACAAGGAAAGTAGCTGCAGCAACGGCCATCATTGTTGGACTTGTTCTTGTGATTTTGGTGTCTGGATTCTTCTTGTGGAGAAAATATCATTCCAGAAAGACAACTGGGCAGGAAGTGTTACTAAAAATTGTTCATGATAACTCCACAACTGGGATTTCATCTGAGATCCTTGCAAATGCCAGATTCATTTCTCAAACAGTGAAGCTAGGGACACAAACTACTTCAACCTGTCGACAGTTTTCATTAGAGGAATTGAAGGAAGCCACAAAAAACTTTGACTTGTCAACTTATATTGGTGCAGGCTCCATAGGGAAGCTGTTCAAAGGTAAACTAGAGAATGGATCCTACGTGGCAATACGATCTTTGGCTCTGTCAAAGAAATGCTCAATTCAAAATCTTAGAGCTAAATTGGATTTACTCTCAAAGCTTCAACATCCAAATTTGGTTAGCCTTTTGGGCCATTGTATTGATGGTGGTGGACAAGATGATCCCAATTCCCACAAGCTTCATCTTGTATACGAGTATGTGCCAAATGGGAATTATCGTACACATCTGTCAGAATTTTCTGTAGAGAAGGCACTCAAGTGGTCTGATAGATTGGCAATTTTAATTGGAATTGCAAAGGCAGTGCATTTCTTACATACTGGTGTTATACCTGGCTGTTTTAGTAACCAACTGAAGACAAAGAATGTCTTACTTGATGAACACCGCATTCCAAAACTGAGTGACTACGGTATGTCCATCATCACAGAAGAAATTGAAAATTTGAGCCGAAGTACAAAAGCGGAGGACGATGTTTATAATTTTGGATTCATATTGTTTGAATCACTTGTTGGACCTATAGCATGCGACAAAGGTGAAACATTTTTTCTGAATGAAAAGGCATCATTTGGCAGTCAAGATGGTCGAAGAAAGATTGTGGATCCTATAGTGTTGACCACTTGCTCTCAAGAGTCATTATCAATTGCAATATCAATAACAACCAAATGCATATCTCCAGAATCTTCATTTCGTCCCTCTTTTGAGGATGTCCTATGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAGCAGATGCAGACCAGAAATCAGATTAA 2283 0.3999 MMFQAGSMRHFCYLYLVVLSWFLFIPNTHELQAAQTQALLQLRVYLEYPSSLQIWENYNWDLCSLSPSANMSIKCEDDEVTELKIMGEKSEKPPRFNGFAVPNQTLSMNFSIDSFFTTLTRLTSLRVLSLVSLGIWGPLPDKIHSFSLLQVLDLSSNFLFGAIPPKISTMVNLHALTLDDNYFNTIMPDWLDSLSNLNILSVKSNGLKGSFPSSLCKIKTLEVISLSHNELSGELPGLSSLTGLHVLDLRENHLESELPLLPKSVVTVLLSNNSFSGEIPKQFGELDQLQHLDLSSNHLTKTPPPTLFSLPKVSYLNLAGNVLSGALPDKLNCGSKLGFVDISSNKLSGGLPSCLANTSDGRVVRYAGNCLSVDSQNQHRGSYCRESSTGWKIFKTRKVAAATAIIVGLVLVILVSGFFLWRKYHSRKTTGQEVLLKIVHDNSTTGISSEILANARFISQTVKLGTQTTSTCRQFSLEELKEATKNFDLSTYIGAGSIGKLFKGKLENGSYVAIRSLALSKKCSIQNLRAKLDLLSKLQHPNLVSLLGHCIDGGGQDDPNSHKLHLVYEYVPNGNYRTHLSEFSVEKALKWSDRLAILIGIAKAVHFLHTGVIPGCFSNQLKTKNVLLDEHRIPKLSDYGMSIITEEIENLSRSTKAEDDVYNFGFILFESLVGPIACDKGETFFLNEKASFGSQDGRRKIVDPIVLTTCSQESLSIAISITTKCISPESSFRPSFEDVLWNLQYAAQVQATADADQKSD 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00472 760 Gene3D Ribonuclease Inhibitor 32 263 IPR032675 -
Pumo11g00472 760 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 32 263 - -
Pumo11g00472 760 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 36 358 - -
Pumo11g00472 760 ProSiteProfiles Protein kinase domain profile. 487 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00472 760 SUPERFAMILY Protein kinase-like (PK-like) 467 743 IPR011009 -
Pumo11g00472 760 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 571 760 - -
Pumo11g00472 760 SUPERFAMILY L domain-like 119 372 - -
Pumo11g00472 760 SMART LRR_typ_2 286 310 IPR003591 -
Pumo11g00472 760 SMART LRR_typ_2 241 264 IPR003591 -
Pumo11g00472 760 SMART LRR_typ_2 170 193 IPR003591 -
Pumo11g00472 760 Gene3D Transferase(Phosphotransferase) domain 1 571 760 - -
Pumo11g00472 760 ProSiteProfiles Leucine-rich repeat profile. 220 242 IPR001611 GO:0005515
Pumo11g00472 760 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 570 - -
Pumo11g00472 760 ProSiteProfiles Leucine-rich repeat profile. 288 309 IPR001611 GO:0005515
Pumo11g00472 760 Pfam Protein tyrosine and serine/threonine kinase 489 656 IPR001245 GO:0004672|GO:0006468
Pumo11g00472 760 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 265 389 - -
Pumo11g00472 760 Gene3D Ribonuclease Inhibitor 264 389 IPR032675 -
Pumo11g00472 760 Gene3D Phosphorylase Kinase; domain 1 445 570 - -
Pumo11g00472 760 Pfam Leucine rich repeat 172 231 IPR001611 GO:0005515
Pumo11g00472 760 Pfam Leucine rich repeat 266 323 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00472 Pumo-Chr11 17384087 17389712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00472 8 688 Miscellaneous Gene Families AT5G14210 57.429 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pumo11g00472 PK_Tyr_Ser-Thr 2.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00472 - - gmx:100780663 1340.1