Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo11g00462 | ATGTCTCCTACAGCATTAGGTATATTGAAGGAGAAGGAACGTGATAACTTACCAACAACATTTGATTTTTCAACCATCGATATTGCCACAAATCACTTTTCTAACACGAACAAGTTAGGAGAAGGTGGCTTTGGACCGGGCATATTGGTAGATGGACAAGAGATTGCAGTCAAGAGGCTTTCTAAAACTTCAAGACAAGGAACTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAGCACCATAATCTTGTAAAACTTCTTGGTTGTTCTATCCAACAAGATGAAAAGTTGTTGATCTATGAATTCATGCCCAATAGAAGCTTGGATTACTTTATTTTTGATACAACGCAAGTTAAATTACTAGATTGGACAAAGCACTTGGAAATTATTGAGGGAATTGCTCGAGGACTTTTGTATATTCATCAAGATTCTACAATAAGAATCATACATAGAGATCTCAAAACAAGTAATATTCTTCTTGATAACAATATGATTCCAAAGATATCAGATTTTGGGTTAGCAAGAACATTTGGAGGAGATCAAGCTGAGACAAATACAAATAGAGTAATGGGAACATATGGTTATATGCCTCCAGAATATGCAGTGCATGGGTCTTTCTCAACCAAATCTGATGTTTTTAGTTTCGGTGTAATTGTTATTGAGATAATTAGTGGGAGAAAGAATCATGGATTTCATGACCCTCACCATCATCATCTTAACCTTCTAGGCCATGTAAGCTTGAAGTGTTTTCAATCTTGTGATACTCCCAAAACCAAGCCAGCCTGGGTTCTGCATAGGACAAGATAA | 816 | 0.364 | MSPTALGILKEKERDNLPTTFDFSTIDIATNHFSNTNKLGEGGFGPGILVDGQEIAVKRLSKTSRQGTEEFKNEVKLMATLQHHNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFIFDTTQVKLLDWTKHLEIIEGIARGLLYIHQDSTIRIIHRDLKTSNILLDNNMIPKISDFGLARTFGGDQAETNTNRVMGTYGYMPPEYAVHGSFSTKSDVFSFGVIVIEIISGRKNHGFHDPHHHHLNLLGHVSLKCFQSCDTPKTKPAWVLHRTR | 271 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo11g00462 | 271 | Pfam | Protein tyrosine and serine/threonine kinase | 37 | 231 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo11g00462 | 271 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 241 | IPR011009 | - | |
Pumo11g00462 | 271 | SMART | serkin_6 | 33 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo11g00462 | 271 | Gene3D | Transferase(Phosphotransferase) domain 1 | 106 | 264 | - | - | |
Pumo11g00462 | 271 | ProSiteProfiles | Protein kinase domain profile. | 33 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo11g00462 | 271 | FunFam | Uncharacterized protein | 37 | 105 | - | - | |
Pumo11g00462 | 271 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 12 | 246 | - | - | |
Pumo11g00462 | 271 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase B120 | 106 | 197 | - | - | |
Pumo11g00462 | 271 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 151 | 163 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo11g00462 | 271 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 105 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo11g00462 | Pumo-Chr11 | 16766081 | 16767177 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo11g00462 | 21 | 236 | Receptor kinase-like Gene Family | AT4G05200 | 61.187 | 2.40e-96 | 295 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pumo11g00462 | PK_Tyr_Ser-Thr | 4.7e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo11g00462 | - | - | tpra:123915365 | 399.053 |