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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pumo11g00461
ATGCAGGAGTTCTCACTTTCCTCTTTTGTTGAGAGAATTTTCACTTTGAATTGTTTTACTCACCAGATGGCTGTTGTGTTTGACAAGGTCGTGGGTATTTCACCTTGCAAACAGACTTGGTCATTGAAAGTTAGGGTAATCCGTGTATGGCATATGTACCCTGTTGGTTCTGTCAATTCTGATAAGCCATTTGCTTTGGAAATGGTTTTAATTGATTATGAAGGTTGTAAGATTCAAGCCACTATAAGAAAGCCAATGATGAGGAAATTTCATCGTTGTGTAGTTGAGGGTGAAGTTTATAAGATGAGTTTCTTTGGGGTGATTCCTAATTCTGGATCTTATAGGGCTGCGAACCATGAGTACAAACTTATCTTTCATGCCAAAACATCTATTAATCGTTGTGATGATGGATCAATTCCAAAGAATGGTTTCTCTATAATGGATTCCGATCAAGTTAACCAAACAAATGGCCAGTGTGATTATCTCATTGATGTTTTGGGTGTAATCACTGCTGTATCTGAAGAGAGATTATCTGTCAAAGATGGCAAAACTACAAGGCTTATTGTTTTCAAGATGCACGACGACAAAGGTAAGATGCACTGTGCATTGTTTGGTGACTATGTTGATACTATTAATGAACTTATTGCTGGACGTGGGAAAGAATTACCAACTATCCTTATACAATTTGCTAAAATCAAAACATACAAGGGTCAGACTGTTGTGCAGAATGTAATGACCATGTCTAGAGTTATAGTAGAACCACAAACTGATGCGGCAATGCAACTTAAGGCCAGGATGACTGCGATTGGATTTCTTCATGATGGTCCTTTGGCTGTTATCGAGGACAAGAAGAAATTTGTTCCAATGAAACAAGAGTTTCTGGAAATGTTTCCTCGGAAAACTATTTTTCAAATTCATACAATTGAAGAGGATGGAGTATTTATTGTATTGGGAACCATTGTTTCTGTTCTTGATAATTATCAATGGTGGTATGAAGCCTACAAATGCAATAGGGCAGCCACCCTTAAAGGTGGAATGAAATATTGTTCTTCTTGCCAGGTTAACGTGGTTGAAATAACTCATAGGTATTATAAGCTTAGACTGGAGGTGTTTGATGGGAGTGATACTGCTGCGTTTATCGCGTTTGACAGTGATTGTTTTAAACTACTTAATGAATCATGTGATTCTTTGGTCAAGGACATTACGTTGTAA
1212
0.3746
MQEFSLSSFVERIFTLNCFTHQMAVVFDKVVGISPCKQTWSLKVRVIRVWHMYPVGSVNSDKPFALEMVLIDYEGCKIQATIRKPMMRKFHRCVVEGEVYKMSFFGVIPNSGSYRAANHEYKLIFHAKTSINRCDDGSIPKNGFSIMDSDQVNQTNGQCDYLIDVLGVITAVSEERLSVKDGKTTRLIVFKMHDDKGKMHCALFGDYVDTINELIAGRGKELPTILIQFAKIKTYKGQTVVQNVMTMSRVIVEPQTDAAMQLKARMTAIGFLHDGPLAVIEDKKKFVPMKQEFLEMFPRKTIFQIHTIEEDGVFIVLGTIVSVLDNYQWWYEAYKCNRAATLKGGMKYCSSCQVNVVEITHRYYKLRLEVFDGSDTAAFIAFDSDCFKLLNESCDSLVKDITL
403
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pumo11g00461
403
CDD
RPA1_DBD_B_like
164
254
-
-
Pumo11g00461
403
SUPERFAMILY
Nucleic acid-binding proteins
27
136
IPR012340
-
Pumo11g00461
403
Pfam
Domain of unknown function DUF223
67
135
IPR003871
-
Pumo11g00461
403
Gene3D
-
290
402
IPR012340
-
Pumo11g00461
403
SUPERFAMILY
Nucleic acid-binding proteins
297
399
IPR012340
-
Pumo11g00461
403
Gene3D
-
28
137
IPR012340
-
Pumo11g00461
403
Gene3D
-
138
270
IPR012340
-
Pumo11g00461
403
SUPERFAMILY
Nucleic acid-binding proteins
152
271
IPR012340
-
Pumo11g00461
403
CDD
RPA1_DBD_A_like
41
131
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pumo11g00461
Pumo-Chr11
16739974
16742132
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pumo11g00461
30
397
Core DNA Replication Machinery Family
AT5G08020
23.177
1.41e-17
82.8
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pumo11g00461
-
-
lja:Lj6g3v0884310.1
293.123
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