Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00445 ATGGTTCAAAGAAAGGTGCCTAGCAAGCTTGGTATCCAAGCTGAACATGTTAAATCAGACAAGAGGTTGGCAAACCTTAAACTATCTTCATCTCAGCACCAAGATGGGAAAAGTAGAGTGGCTGATATGAAGAAGAAAATGAAAAAATCAAGGTCAATAAAGCTTTCTGATCTTGAGGCTCTTCAATCATCATCATCATCATCATCATCATCACCTTCAAGGAGAAGCTTGTCTCAACCAGGAAAGCCACCCCCTCTTCATACTCCAACAACTACAGCATCAGCATCACCACAGAAGCAGCAACCTTTGTTCAGAACAACAGATGGTTCACCCAATTACATGAAGCCAACAAGCAGTTCACATGCCAAAAAGGAGCTTTTCCAGGTAAGCCACAGGAACACTCAACCTGGTTCTGATTTTAAGAGTCTTACTAGGAAATTTTCCAGTGATTCCAAAGCTGCCTGTGTTAAGAAACCTGCAAAAGCCTTGACAAGAACATCTAGTTTGAGTCTGGTAACATTGACAAAAACCACTAGCTTCAAGGCTTCTAGAGCTTGTTCTAGAAAATCCACCAGGGCTGTTATGTGTGCAGACATGAGTGCACCACAGAGATCCACTTGTTCTTCAACTTTGAAGGACTCAAAGTTCCCTGCATACCTCATGCTTAGCCCTGGGGGAACCGAGTCAGAGGGAACTTCAGCCATGAAGGTTTGCCCTTACACATATTGTTCTCTTAATGGTCACCATCATGCTGATTTGCCACCGTTGAAGAGCTTCATGTCCACGAGGAGGCGGCTTTTGAAGACGCAGAAGCGTGCTAAGCTTGAAGCTCTTAGCCCTCGAAGACTGAAGGCCCCCCTTGAGACACAGAAGGAGGACTCTGATGTTGAGCAGAATGTCTTTAATGCAAAACCTTCTTGTGATGAAATTGGCATTGATATCTTCATTGAAATCTATGCTAATGAAAAGGATGCAAAACCAACAGCAGCAGAAGAAATGGGCAGAATAGATTTTCTGAAAGAGATTGAGGATCAAGAAGATAACAAGTCAACAATTGAGGATGATGGCATAGCAGCAAGTGAGGAGGGTGTCATGAAAGTCATTACTCCAAGAATTATTGGTATTCCTTCTCCCCTTATATCTGAAATTGATCTTGAGGAGGATTTGAAAAAATCCTTAGATGATGTTGCAATTGAAGTAGATACCACCAAAGGAAGCTTTCTCCAAGAAAAAAATGCAGAAGATGCAGATGAAGATCACCAATCTATTGTCAGGTCTCATGAGGAAATGAGCATGGGAAGCTACTGCAGTGATGGGGAACAAGACATGGGGGATGTTGACATGGATGATTCTGATTCCAAAACCTATGACATGGAGTGGGAGGAGGAGCGGTTGCATGGATTCGATCACGAAGAGGATGCTGATTCTTCTGTGTACACAGAGGAGGACAATGACTCAAAAGCTGAGTCCTCACCAGAGAGTTCTCATGATGTGTCAGTGACATGGTTGGATGATATCCTTGGTGGCTATTATGAGGACTTTCTGGTTGATGAAACACACAAAGAAGCCAATTCAGAACAAGGCACCTACTTTGAAGAACAACCTAGTGGCATTGGTTCTGTCCTTGAAGACACTAATGGAAGCAATAAAACTCAAGACATTGAGTACTCCTCCACAGGTATGGGTTGTGAACAATCTTCTTTTACAGAGGAAATATTTGAGTACCTGGCAAATGCACAAGAAAGTGTTGGAGAAAATGAAAAACATGAGGATGATGAGGCCAGTTGCAACACAAAGGCACTTGATGAAGAGACAATTGACAACACTCAATGTCAGAAGATCAGTGAAACTTGCAAAATTGAAGAGACAAGTGAAGATGGATACTCAATCAGCCTAGAGAACAATGATGAGAGCAACAAAGGGGAGAGCCAAATTGAATTGGAGGATGTGTCTGAAGAAAGTAACATAGCAGCTCAAGATCAGGATTTGTTGGACAAAGACCAAGGCAAAGCTAGAAGGTTCCAACAAAACACAAGTTGCATAGGTGGTGAAGAGGAGAGCACAAGCAAGAATTGGAAAGTTGCAATTATAAGAAAGAGGGGTGTTGAAGATGATGATGATGAAATGAGAAAGTTCAACCCAAAAGAGCCAAATTTTCTGCCCTTGGTTCCTGAACCAGGAAAAGAAAAGGTTGACCTGAGGCATCAAATGATGGATGAGAGAAAGAACTCAGAGGAATGGATGCTTGATTGTGCACTGAGACAAGCTGTGACAAAACTTGCTCCAGCTAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACAGTGATGCCAGCAGCACCCAAATGTGAAACACGTGTGAGAAACAATTCAGCATTTGGTTATTCAGGAACAATTCAAGCTTGTAGCTGA 2418 0.4247 MVQRKVPSKLGIQAEHVKSDKRLANLKLSSSQHQDGKSRVADMKKKMKKSRSIKLSDLEALQSSSSSSSSSPSRRSLSQPGKPPPLHTPTTTASASPQKQQPLFRTTDGSPNYMKPTSSSHAKKELFQVSHRNTQPGSDFKSLTRKFSSDSKAACVKKPAKALTRTSSLSLVTLTKTTSFKASRACSRKSTRAVMCADMSAPQRSTCSSTLKDSKFPAYLMLSPGGTESEGTSAMKVCPYTYCSLNGHHHADLPPLKSFMSTRRRLLKTQKRAKLEALSPRRLKAPLETQKEDSDVEQNVFNAKPSCDEIGIDIFIEIYANEKDAKPTAAEEMGRIDFLKEIEDQEDNKSTIEDDGIAASEEGVMKVITPRIIGIPSPLISEIDLEEDLKKSLDDVAIEVDTTKGSFLQEKNAEDADEDHQSIVRSHEEMSMGSYCSDGEQDMGDVDMDDSDSKTYDMEWEEERLHGFDHEEDADSSVYTEEDNDSKAESSPESSHDVSVTWLDDILGGYYEDFLVDETHKEANSEQGTYFEEQPSGIGSVLEDTNGSNKTQDIEYSSTGMGCEQSSFTEEIFEYLANAQESVGENEKHEDDEASCNTKALDEETIDNTQCQKISETCKIEETSEDGYSISLENNDESNKGESQIELEDVSEESNIAAQDQDLLDKDQGKARRFQQNTSCIGGEEESTSKNWKVAIIRKRGVEDDDDEMRKFNPKEPNFLPLVPEPGKEKVDLRHQMMDERKNSEEWMLDCALRQAVTKLAPARKKKVALLVEAFETVMPAAPKCETRVRNNSAFGYSGTIQACS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00445 805 MobiDBLite consensus disorder prediction 525 563 - -
Pumo11g00445 805 SMART CaM_binding_2 668 780 IPR012417 GO:0005516
Pumo11g00445 805 MobiDBLite consensus disorder prediction 528 563 - -
Pumo11g00445 805 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 780 IPR044681 GO:0005516
Pumo11g00445 805 MobiDBLite consensus disorder prediction 460 498 - -
Pumo11g00445 805 MobiDBLite consensus disorder prediction 705 726 - -
Pumo11g00445 805 MobiDBLite consensus disorder prediction 88 126 - -
Pumo11g00445 805 MobiDBLite consensus disorder prediction 460 492 - -
Pumo11g00445 805 MobiDBLite consensus disorder prediction 56 77 - -
Pumo11g00445 805 Pfam Plant calmodulin-binding domain 673 780 IPR012417 GO:0005516
Pumo11g00445 805 MobiDBLite consensus disorder prediction 1 126 - -
Pumo11g00445 805 MobiDBLite consensus disorder prediction 625 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00445 Pumo-Chr11 16262154 16266035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00445 517 805 Calmodulin-binding Proteins AT2G38800 31.544 1.91e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00445 - - gmx:102660315 1268.06