Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00441 ATGGAGAAAAATAAGGTAGTCATGCTAATTGTGTGCTGTTTACCCTTCTGCTTCAAGCCTACTTTCTCTAAACAAGAAATTGTCACCATTACACCAAATCAGACTATCCAACATGATGACACCCTTGTTTCTGCATCTGGAACCTTTGAAGCAGGATTCTTCAGCTTTGGAAGTCCGCAACGCCAATACTTTGGCATATGGTACAAGAGCATATCACCTAGGACTATTGTGTGGGTTGCCAACAGAGATACCCCAGTACAAAACTCAACTATAGCTCTAAAACTAACTCATCAAGGGGCTCTTATCATCACTGATGGCTTCAAGGGTTTAATTTGGTCCTCCAACTCATCAACAATAGCTAAGAACCCAGTTGTGCAGCTTCTAGACTCAGGAAACCTTGTTGTAAAAGATGGAGTCAACTCAGTGAACTTCTTGTGGCAAAGCTTTGATTACCCTGGTGACACTTTCCTTGCAGGAACGAAGCTGAAAAGCAATTTGAAAAAGGGTCCATATAGGTCTCTCACATCTTGGAGAGACCCTGAAGACCCTGCTCAAGGTGAGTTTTCTTCTCACATAGATATTCACGGCTTTCCTCAACTAGTTCTGACAAAGGGAGAGACTTTCGTTTATCGTTCCACTCGAGCTTCTAGGCTAGGAACGCATAGCTTCTTGAATGCCTCTTTTGTTCTAACTGACAAAGAAGCCTATTATGAATTTGATAGCTCAGTTGCTACTAGAGCAGTGCTACTTTCGTCGGGAGTTTCACAAGTTTTACTATGGTCAGATCAGAAGAAACATTGGGATATTTTGTATACTCATCCCATGGAACAGTGCGAATATTTTGGCTTGTGTGGTGCTAATTCTAATTGCATAGCTGATGAAGACCCAGTATGTGAGTGCTTGGAAGGTTTCATACCCAAATTTCAAGCAAAATGGGATTCTTTGAATTGGGCTGGTGGGTGTGTTAGAAGAAGAAATTTAAATTGTGATGGTGGAGATGGGTTTCTCAAGTACGCAGGAATGAAGTTGCCAGACACATCTTCTTCCTGGTATCAAATGAATGTGAGCCTTGAGGAATGTAAGACATTGTGTTTGAAAAATTGTTCATGCTCAGCATATGCAAACTTCGATTCGGAAGGTGGTGGAAGTGGCTGTGTGCTTTGGTTTGGTGACATTATGGACTTCAGAGTACAAACTGACCAAGGACAAGATGTTTACATACGACTGGCATCTTCAGAACTAGATCATCTAAAAAAGAAGGGGAACTTTAACAAAAAGAAGCTTGCTGGGATTGTAGTAGGCATTACCACATTCATTATAGGCCTGGCAATCCTTGGATTGGCCACAAAAGCATTTGTACAGAGAAACAAGAAGACAGGAATTATAGACAAAATAATTGACTGGAGGAGCAAGAGAGAAAAAGAAGACATGGACTCACCTACAATATTTGACTTTTCAACCATCTCTCATGCCACAAATCACTTTTCAGACAGTAAGAAATTAGGAGAAGGCGGTTTTGGACCAGTCTATAAGGGTGTATTGGCAGATGGGCGGGAGATAGCTGTCAAGAGGCTATCTGAAACTTCTACACAAGGAACAAAAGAATTCAAAAATGAAATGATGTTGATGGCAACACTTCAGCACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGCTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTATTTTCTTTTTGATTCAATGCGAAGTAAAGTGCTAGATTGGACTAAGCGCTTTCAAATTATTGATGGAATTGCTCGTGGGCTTCTTTATCTTCATCAGGATTCTAGATTAAGAATCATCCATAGAGATATCAAAGCTAGCAACATTCTTCTAGATAACGACATGAATCCAAAGATATCAGATTTTGGTTTGGCTAAAACATTTGGAGATCAAGCCGAGGCCAAAACTAACAGAGTGATGGGAACATATGGTTATATGTCTCCAGAATATGCAGTGCGTGGATCTTTTTCAATCAAATCTGACATTTTTAGCTTTGGTGTCATTGTAATTGAGATAATTAGCAGAAGGAAGAATCGTGAATTTTGCGACCCTAACCATCATCATAATCTTCTTGGTCATGCATGGAAGCTATGGGTAGAAGAAAGGCCACTAGAATTAGTGGATGACATGTTGGTTGATGTGACCACGTCATCATCAGAAATACTGCGATGTATTCATGTTGGTCTTTTATGTGTACAACATAGACCTGAAAATAGGCCTAACATGTCATCTGTAGTTTTAATGTTGAACGGTGGCAAGTTATTCCCTGAACCAGGCCTACCTGGGTTCTATACAGAAAGAGATTCCCCGAAACCATCCGAGGAGCATTCTCTAAATCAAGTTTCAATCTCAATAATAGAGGCGCGTTAG 2421 0.4019 MEKNKVVMLIVCCLPFCFKPTFSKQEIVTITPNQTIQHDDTLVSASGTFEAGFFSFGSPQRQYFGIWYKSISPRTIVWVANRDTPVQNSTIALKLTHQGALIITDGFKGLIWSSNSSTIAKNPVVQLLDSGNLVVKDGVNSVNFLWQSFDYPGDTFLAGTKLKSNLKKGPYRSLTSWRDPEDPAQGEFSSHIDIHGFPQLVLTKGETFVYRSTRASRLGTHSFLNASFVLTDKEAYYEFDSSVATRAVLLSSGVSQVLLWSDQKKHWDILYTHPMEQCEYFGLCGANSNCIADEDPVCECLEGFIPKFQAKWDSLNWAGGCVRRRNLNCDGGDGFLKYAGMKLPDTSSSWYQMNVSLEECKTLCLKNCSCSAYANFDSEGGGSGCVLWFGDIMDFRVQTDQGQDVYIRLASSELDHLKKKGNFNKKKLAGIVVGITTFIIGLAILGLATKAFVQRNKKTGIIDKIIDWRSKREKEDMDSPTIFDFSTISHATNHFSDSKKLGEGGFGPVYKGVLADGREIAVKRLSETSTQGTKEFKNEMMLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFLFDSMRSKVLDWTKRFQIIDGIARGLLYLHQDSRLRIIHRDIKASNILLDNDMNPKISDFGLAKTFGDQAEAKTNRVMGTYGYMSPEYAVRGSFSIKSDIFSFGVIVIEIISRRKNREFCDPNHHHNLLGHAWKLWVEERPLELVDDMLVDVTTSSSEILRCIHVGLLCVQHRPENRPNMSSVVLMLNGGKLFPEPGLPGFYTERDSPKPSEEHSLNQVSISIIEAR 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00441 806 SMART blect_4 33 152 IPR001480 -
Pumo11g00441 806 Gene3D Phosphorylase Kinase; domain 1 461 570 - -
Pumo11g00441 806 Pfam S-locus glycoprotein domain 224 307 IPR000858 GO:0048544
Pumo11g00441 806 Gene3D - 22 149 IPR036426 -
Pumo11g00441 806 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 753 - -
Pumo11g00441 806 SMART serkin_6 495 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00441 806 Gene3D Hepatocyte Growth Factor 325 413 - -
Pumo11g00441 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Pumo11g00441 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 571 773 - -
Pumo11g00441 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 328 409 - -
Pumo11g00441 806 Pfam Protein tyrosine and serine/threonine kinase 498 763 IPR001245 GO:0004672|GO:0006468
Pumo11g00441 806 ProSiteProfiles Protein kinase domain profile. 495 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00441 806 CDD B_lectin 41 152 IPR001480 -
Pumo11g00441 806 PIRSF SRK 1 806 IPR024171 GO:0004674
Pumo11g00441 806 CDD PAN_AP_plant 326 410 - -
Pumo11g00441 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
Pumo11g00441 806 ProSiteProfiles PAN/Apple domain profile. 329 410 IPR003609 -
Pumo11g00441 806 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Pumo11g00441 806 SUPERFAMILY Hairpin loop containing domain-like 333 403 - -
Pumo11g00441 806 Pfam D-mannose binding lectin 75 178 IPR001480 -
Pumo11g00441 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 570 - -
Pumo11g00441 806 SMART ntp_6 330 409 IPR003609 -
Pumo11g00441 806 Pfam PAN-like domain 329 394 IPR003609 -
Pumo11g00441 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 183 IPR036426 -
Pumo11g00441 806 Gene3D Transferase(Phosphotransferase) domain 1 571 771 - -
Pumo11g00441 806 SUPERFAMILY Protein kinase-like (PK-like) 477 766 IPR011009 -
Pumo11g00441 806 CDD STKc_IRAK 501 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00441 Pumo-Chr11 15822157 15825698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00441 415 781 Receptor kinase-like Gene Family AT4G23190 53.067 5.31e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00441 PK_Tyr_Ser-Thr 6.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00441 - - tpra:123915365 1026.16