Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00426 ATGCCTATTTACGAAGGCATACAGTCAGATCCGACATTGAATAATGTTTTCAATGATGCAATGGCTAATCTGGGCACAATCGAGATGAACAAGTTGCTTGAAATATATGGAGGATTTGAAGAAATATCGTTGCTAGTTGATGTGGGCGGTGGCATTGGCCAAAATTTGAATTTGATAATCTCCAAGTATCCTTCTATAAAGGGTATTAATTTTGATCTACCCCATGTGATACAAAATGCTCCAATTTATCCAGGGATAGAGCAACTTGGAGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCTATAATGTTGAAGCACGTATTGCACAATTGGTCGGACGAAAAATGTATACAAATTTTAAGGAATTGCAACAAAGCTTTGCCAGAAAATGGGAAGGTAATCGTTGTGGATATCATAATGCCTGAAGCAATTCACTCTACAGAAGCAGATAAGATGGTTACGGGCTTTGACAACCTCATGTTTCTGGATGGTGGGACCGAAAGAACAGAGAAAGAATTTCAGAATTTATGCAAACGTTCGGGATTTTCTAATTTTCAAGTTGTTGGTCGTGTCTTCTCTGCTCTAGGAGTGATAGAATTTCGTAAGTGA 612 0.384 MPIYEGIQSDPTLNNVFNDAMANLGTIEMNKLLEIYGGFEEISLLVDVGGGIGQNLNLIISKYPSIKGINFDLPHVIQNAPIYPGIEQLGGDMFESVPKGDAIMLKHVLHNWSDEKCIQILRNCNKALPENGKVIVVDIIMPEAIHSTEADKMVTGFDNLMFLDGGTERTEKEFQNLCKRSGFSNFQVVGRVFSALGVIEFRK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00426 203 PANTHER O-METHYLTRANSFERASE 7 183 IPR016461 GO:0008168
Pumo11g00426 203 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 203 IPR016461 GO:0008168
Pumo11g00426 203 Pfam O-methyltransferase domain 1 184 IPR001077 GO:0008171
Pumo11g00426 203 CDD AdoMet_MTases 45 141 - -
Pumo11g00426 203 Gene3D Vaccinia Virus protein VP39 14 189 IPR029063 -
Pumo11g00426 203 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 198 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00426 Pumo-Chr11 15345635 15346491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00426 1 203 Monolignol Biosynthesis Gene Families AT5G54160 53.659 6.95e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00426 - - pvu:PHAVU_005G0323000 311.997