Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00423 ATGGGTTCCATTTGGCAACAGAATTCCCCTGAATGTGCTGAGGAAAACAATGCATGCATCTATGCATTGCAGCATTGCTTTGGTCCAATAATATATTCAGCAGTATTGAAGGCTGCCCTTGAACTCAACCTTTTTGAGATCATAGCAAAGGCATCTCCACTTGGTGTCTCAGCATCTGATGTTGCTTCTCAACTTCCAACACAACACCCTGAATTGCCTCAAAGGCTTGATCGCATGCTGTCTCTACTTGCAAGTCACTCTCTTCTTACTTGTTCCACTCGCACAAATGAAGATGGTAACCCTCAAAGGCTTTACCAGCTATCACTTGCTGGTAACTACTTTGTCAAAGATGAGAATAATGGCTCTTTAGCTTTCCTCTCAACTTTTCTGAGTCACCAAGCAATCGTGGATGTCTTCCTCAATTTCAAGGAGATACTTCTGGACTTTGACAAGGGCGTATTCGAGAAAGTTCACGGAGTGCCTATTTATGAAGGCATTAAGTCAAATCCGACGTTGAGTAAGGTTTTCAATGAAGCAATGGCTAATATAGGCACAATCGAGATGAACAAGTTACTTGAAATATATGGAGGATTTGAAGGAATATCGTTGCTAGTTGATGTGGGTGGTGGCATTGGCCAAAACTTGCATATGATAATCTCCAAGTATCCTTCTATAAAGGGTATTAATTTTGACCTGCCCCATGTGATACAAAATGCTCCAATTTATCCAGGGATAAAGCAACTTGGAGGAGACATGTTTAAAAGTGTTCCAAAAGGTGATGCTGTGATATTGAAGGCCGTGTTGCACAATTGGTCGGATGAGAAATGTATACAAATTTTAAGGAATTGCTACAAAACTTTGCCAGAAAATGGGAAGGTAATCGTTGTAGAAATCATAATGCCTGAAGCAATTCACTCAACAGAAGCAGATAAAATGGTAACTGGCTTTGACAACCTCATGTTTCTGGATGGTGGGATCGAAAGAACAGAGAAAGAATTTGAGAATTTATGCAAACGCTCAGGATTTTCTGATTTTGAAGTTGCTGGTCGTGTCTTATCTGGTCTAGGAGTCATAGAATTTCGCAAGTGA 1089 0.405 MGSIWQQNSPECAEENNACIYALQHCFGPIIYSAVLKAALELNLFEIIAKASPLGVSASDVASQLPTQHPELPQRLDRMLSLLASHSLLTCSTRTNEDGNPQRLYQLSLAGNYFVKDENNGSLAFLSTFLSHQAIVDVFLNFKEILLDFDKGVFEKVHGVPIYEGIKSNPTLSKVFNEAMANIGTIEMNKLLEIYGGFEGISLLVDVGGGIGQNLHMIISKYPSIKGINFDLPHVIQNAPIYPGIKQLGGDMFKSVPKGDAVILKAVLHNWSDEKCIQILRNCYKTLPENGKVIVVEIIMPEAIHSTEADKMVTGFDNLMFLDGGIERTEKEFENLCKRSGFSDFEVAGRVLSGLGVIEFRK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00423 362 Gene3D Vaccinia Virus protein VP39 173 348 IPR029063 -
Pumo11g00423 362 CDD AdoMet_MTases 204 296 - -
Pumo11g00423 362 Pfam O-methyltransferase domain 152 343 IPR001077 GO:0008171
Pumo11g00423 362 PANTHER O-METHYLTRANSFERASE 32 342 IPR016461 GO:0008168
Pumo11g00423 362 Pfam Dimerisation domain 35 84 IPR012967 GO:0046983
Pumo11g00423 362 Gene3D - 31 191 IPR036388 -
Pumo11g00423 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 362 IPR016461 GO:0008168
Pumo11g00423 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 348 IPR029063 -
Pumo11g00423 362 PIRSF O-mtase 4 362 IPR016461 GO:0008168
Pumo11g00423 362 FunFam Caffeic acid 3-O-methyltransferase 3 114 - -
Pumo11g00423 362 SUPERFAMILY "Winged helix" DNA-binding domain 14 118 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00423 Pumo-Chr11 15287205 15289477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00423 1 362 Monolignol Biosynthesis Gene Families AT5G54160 46.322 6.27e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00423 - - gmx:100784030 503.056