Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00422 ATGCTGTCTCTTCTTGCAAGTCACTCTCTTCTTACTTGTTCCACTCCCACCAATGAAGATGGTAACCCTCAAAGGCTTTACAAGCTATCACTTGCTGGTAAATACTTTGTCAAAGATGAGAATAAGGGCTCTTTAGCTGTCCTCTCATCTTTTCTGAGTCACCAATCAATCGTGGATGTCTTCCTCAATTTCAAGGAGATACTTCTGGACTTTGACAAGGGCGTATTCGAGAAAGTTCACGGAGTGCCTATCTATGAAGGCATACAGTCAAGTCCGACGTTGAATAAGGTTTTCAATGAAGCAATGGCTAATATAGGCACAATCGAGATGAACAAGTTACTTGAAATATATGGAGGATTTGAAGGAATATCGTTGCTAGTTGATGTGGGTGGTGGCATTGGCCAAAACTTGCATATGATAATCTCCAAGTATCCTTCTATAAAGGGTATTAATTTTGACCTGCCCCATGTGATACAAAATGCTCCAATTTATCCAGGGATAAAGCAACTTGGAGGAGACATGTTTAAAAGTGTTCCAAAAGGTGATGCTATGATATTGAAGGCTGTGTTGCACAATTGGTCGGATGAGAAATGTATACAAATTTTAAGGAATTGCTACAAAGCTTTGCCAGAAAATGGGAAGGTAATCGTTGTGGAAATCATAATGCCTGAAGCAATTCACTCAACAGAAGCAGATAAAATGGTAACTGGCTTTGACAACCTCATGTTTCTGGATGGTGGGATCGAAAGAACAGAGAAAGAATTTGAGAATTTATGCAAACGCTCAGGATTTTCTGATTTTCAAGTTGCTGGTCGAGTGTTATCTGCTCTAGGAGTCATACAATTTCGCAAGTGA 855 0.3977 MLSLLASHSLLTCSTPTNEDGNPQRLYKLSLAGKYFVKDENKGSLAVLSSFLSHQSIVDVFLNFKEILLDFDKGVFEKVHGVPIYEGIQSSPTLNKVFNEAMANIGTIEMNKLLEIYGGFEGISLLVDVGGGIGQNLHMIISKYPSIKGINFDLPHVIQNAPIYPGIKQLGGDMFKSVPKGDAMILKAVLHNWSDEKCIQILRNCYKALPENGKVIVVEIIMPEAIHSTEADKMVTGFDNLMFLDGGIERTEKEFENLCKRSGFSDFQVAGRVLSALGVIQFRK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00422 284 Gene3D - 2 113 IPR036388 -
Pumo11g00422 284 Gene3D Vaccinia Virus protein VP39 95 270 IPR029063 -
Pumo11g00422 284 PANTHER O-METHYLTRANSFERASE 1 264 IPR016461 GO:0008168
Pumo11g00422 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 50 269 IPR029063 -
Pumo11g00422 284 Pfam O-methyltransferase domain 74 265 IPR001077 GO:0008171
Pumo11g00422 284 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 284 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00422 Pumo-Chr11 15275686 15277585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00422 1 279 Monolignol Biosynthesis Gene Families AT5G54160 48.582 4.51e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00422 - - gmx:100784030 416.001