Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00410 ATGGACACAGAGTTCTTTTCCAGTTTTCCTGATAAAGCTATCTCTTATATATCAGATTCGCCATACCCGTGGCTCAAAGATATGAATGGGGATGATAGGGGTAAATACCTGGCTCATACTCTTAACACATGCGCCAAGTTTATTGAATCAGGCAGCTTCATGAATGCAGATACTGGACTGGGCTATATTGCTCACCTTGCCTCCCCTTATGGTGATGCAATGCAAAGGGTAGCCACCTATATTAGTAAGGGTCTAGCTTGCCAAGTCCTGAAAAATTTTCATGGAGTATCTAATGCTCTCAATTTGCCAACAACAACCTCAGAAGAACAACTTGTTAAGAAGTTATTCTATGATCTGTATCCATTTTTAAAGACTGCATATGTCATCACAAGTCATGCCATTGCTGACGCAATGGGAGGGGAAGAAGTGATCCACGTCGTTGATCTCGGTGCATCGGATGCTGCTCAGTGGATTTATCTTATGCAGAGATTAAAAGAAAGCCAAAAGAACCCCCCAGTTCTAAAAATCACAGGCATACATGAGAAGAAGGAGATTTTAGAGGAAGTGGCCACTCACTTGAGAGTAGAAGCTAAAAATTTGAATTTCACCTCCAATTCAATGCTATTGAGCTCACCGGCAGAATCAATGCATCAAAGGACATTTGCTGAGATGATTGGGAAACGAAAGACCAACACCAGTTCTGAATCATCATTGTTACAACTTCCTCTATGTGCTACTTCGACCAAGATGATGCACTTTCTAAATGGCCTGTGGAAACTCCAACCTAGAGTGATGGTGATTACTGAACAAGAATCTGATGTTAATGGTTCTTTGACAGAAAGGGTTGACAAAGCATTGGACTTTTATGTTGCATTGTTCAGTTGCTTGGAATCAACTGTTTCAAATACACTACAAGTAGAGAGAATCATAATGGAGAGGACTCTACTAGGGGAAGAAATAAAGAACATTTTTGCATGTGAAGGAGTTGAGAGAAAGGAGAGGCATGAGAAATTTGAAACTTGGGTTCCAATGCTAGAAATGGCTGGGTTTAGGAAGGGACATATTAGCCATCATGGGATGGTGCAAGCAACAAAACAGTTGCATGGTTATGGAAATGGATATAAGCTTTGTCAGGAGAATAATTGTTTGTTTGTCTGCTGGAATAATAAGCCACTCTTTTCTGTATCAACCTGGACGGTTTAG 1203 0.4065 MDTEFFSSFPDKAISYISDSPYPWLKDMNGDDRGKYLAHTLNTCAKFIESGSFMNADTGLGYIAHLASPYGDAMQRVATYISKGLACQVLKNFHGVSNALNLPTTTSEEQLVKKLFYDLYPFLKTAYVITSHAIADAMGGEEVIHVVDLGASDAAQWIYLMQRLKESQKNPPVLKITGIHEKKEILEEVATHLRVEAKNLNFTSNSMLLSSPAESMHQRTFAEMIGKRKTNTSSESSLLQLPLCATSTKMMHFLNGLWKLQPRVMVITEQESDVNGSLTERVDKALDFYVALFSCLESTVSNTLQVERIIMERTLLGEEIKNIFACEGVERKERHEKFETWVPMLEMAGFRKGHISHHGMVQATKQLHGYGNGYKLCQENNCLFVCWNNKPLFSVSTWTV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00410 400 ProSiteProfiles GRAS family profile. 28 399 IPR005202 -
Pumo11g00410 400 Pfam GRAS domain family 38 399 IPR005202 -
Pumo11g00410 400 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 395 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00410 Pumo-Chr11 14982502 14984805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00410 253 398 GRAS Transcription Factor Family AT1G50420 51.351 9.01e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo11g00410 GRAS 2.5e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00410 - - zju:107417805 357.451