Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00409 ATGAACTTTCATTTGACAACTGAAGCCGGGAAATTGGATTTTCCTTTGCAGTTCTATCCAGTTGTTAGCAAACTGGAAGATGTTGACTTTGAGAAGTTGCCTGTGAAGATAGGAGATGCTCTTGCAATCACTTCTGTTCTTCAGCTGCATTCTCTTCTTGCCACTGATGATGACATGGCTGGGAGGATCTCACCGGCCGCGGCAGCATCTATGAATCTGCAGAGAGCAGTGCATATGGGCCAAAGGACTTTTGCAGAGTGGCTTGAGAGAGATATGATCAATGCATGTATCTTAAGTCCTGATTCTGCATTGTCACCTCTTTCCTTAGGTGCCTCACCTAAGATGGGCATCTTTCTCAACGCTATGCGAAAACTCCAACCAAAACTGGTGGTGATTACTGAACAAGAATCAAATCTGAATGGATCCAATTTGATGGAGAGAGTTGATAGAGCACTGTACTTTTACAGTGCATTGTTTGACTGCTTGGAATCTACTGTTATGAGAACATCAGTAGAGAGACAAAAACTTGAGAGCATGCTTTTTGGAGAGCAGATAAAGAATATCATTGCTTGTGAGGGTGTTGATAGAAAGGAGAGACATGAGAAACTCGAGAAATGGATTCGAAGGCTTGAAATGGCTGGTTTTGTAAAGGTACCTTTGAGCTACAATGGAAGGATAGAAGCAACGAATCTGTTGCAGAGATATAGTAATAAATACAAATTTCGAGAAGAGAATGATTGTTTACTTGTCTGCTGGAGTGATAGACCATTGTTTTCTGTATCAGCTTGGAGTTTTAGGAGATGA 804 0.4142 MNFHLTTEAGKLDFPLQFYPVVSKLEDVDFEKLPVKIGDALAITSVLQLHSLLATDDDMAGRISPAAAASMNLQRAVHMGQRTFAEWLERDMINACILSPDSALSPLSLGASPKMGIFLNAMRKLQPKLVVITEQESNLNGSNLMERVDRALYFYSALFDCLESTVMRTSVERQKLESMLFGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFVKVPLSYNGRIEATNLLQRYSNKYKFREENDCLLVCWSDRPLFSVSAWSFRR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00409 267 ProSiteProfiles GRAS family profile. 1 264 IPR005202 -
Pumo11g00409 267 Pfam GRAS domain family 4 263 IPR005202 -
Pumo11g00409 267 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 260 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00409 Pumo-Chr11 14979291 14980094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00409 1 267 GRAS Transcription Factor Family AT1G50420 50.549 2.86e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo11g00409 GRAS 4.2e-63 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00409 - - gmx:100779726 502.286