Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00399 ATGGCTAAGAAGGGCTGGTTTAGCATGATTAAGAAGCTCTTTTTATGGGACACAGAGTCCTCACAAGAGAAGAAGGGGAAAAGAAGGGCTTGGATATTTGGGAGGGTTAAGACCAAGAGATTGCCTTCAATTACAGCTCCACCGCCACCACCAAAAGAAACAAGACTAAATGAAGCTGAGGAAGAACACAGCAAGCATGCTTTAACAGTGGCCATTGCTTCAGCTGCTGCTGCTGAAGCTGCTATTACTGCTGCTCAGGTTGCTGTTGAGGTTGTTAGGCTCCAATCTGCTGCTCATCAACAACTTAAAGAAAAACAAGAACAACTTCAACCTGTTAAAACTAGCAATGATGCTCCTCATTCTTCTCACCAATGCCAGAGGAAGATTCAAGAATCTTCAGCCATCAAAATTCAAACAGCATTTAGAGGATACCTAGCAAGGAAAGCTTTAAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGCGGAAGAGCTGTGAGACGCCAAGCTTTGAGTACTCTAAGGTGCTTGGAGTCAATAGTAAGTATCCAGTCACAGGTTTTTGCAAGGAGACTCCAAATGGTTGAAGGAAGATGGGATTGTGGTGAACATGAAGAGATGCAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAACAGTGAGAGAAGGTGGGATGACAGCATTTTGTTGAAGGAAGAGGTAGATGCCTCTTGCATAAGCAAGAAAGAAGCAGTTCTTAAGAGAGAAAAAGTAAAAGAATACTCATTTAACCACAGAAGGTCAGCTGAATCAGAAAGAAATAAAATAAATGGAAGATGGAGGTACTGGATGGAGCAGTGGGTAGACACACAACTTTCTAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTATTCTAGACCTGGGGAGGAATGTGGAAGGAGACAACTAAAGCTTAGAAACATTCAGAGACAAAATCAGGTTGAAGCATTAGATTCTCCATCACTTGCTTCAAGGAACTCTTTTCCCCATAGGAGCCAGACTTCAGAGGCAGAAGATCACTCAGTTCCAAGCTCTCCTGCAATTCCAACATACATGGCTGCAACAAAATCAACACAAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGCAAGGCCAGGAGGGAATTTTGACAACAACTCTGATAGCTATTCACCATGCAAGAAAAAGTTACCTATTGTGACTTCTATTAATAGTGAGGTGCTTAGTAATAATGGTAGGATGGGCAAGCTCAGTAGTAGTAATCAGCAAAGATCTCCTAGCTTAAAGGGCCTTCCAAGACCTCTAAAATTAAGTCAGACATTGAGGGATCTCAGCATTAATTCAGATTGCTCAGTGCCAATTTGA 1386 0.4185 MAKKGWFSMIKKLFLWDTESSQEKKGKRRAWIFGRVKTKRLPSITAPPPPPKETRLNEAEEEHSKHALTVAIASAAAAEAAITAAQVAVEVVRLQSAAHQQLKEKQEQLQPVKTSNDAPHSSHQCQRKIQESSAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQALSTLRCLESIVSIQSQVFARRLQMVEGRWDCGEHEEMQGSRDKIIRMDSNSERRWDDSILLKEEVDASCISKKEAVLKREKVKEYSFNHRRSAESERNKINGRWRYWMEQWVDTQLSKSKELEDLDSVFSSHYSRPGEECGRRQLKLRNIQRQNQVEALDSPSLASRNSFPHRSQTSEAEDHSVPSSPAIPTYMAATKSTQAKARSTSSPRARPGGNFDNNSDSYSPCKKKLPIVTSINSEVLSNNGRMGKLSSSNQQRSPSLKGLPRPLKLSQTLRDLSINSDCSVPI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00399 461 SMART iq_5 129 151 IPR000048 GO:0005515
Pumo11g00399 461 Gene3D - 130 181 - -
Pumo11g00399 461 MobiDBLite consensus disorder prediction 325 345 - -
Pumo11g00399 461 Pfam Protein of unknown function (DUF4005) 349 423 IPR025064 -
Pumo11g00399 461 ProSiteProfiles IQ motif profile. 154 181 IPR000048 GO:0005515
Pumo11g00399 461 PANTHER IQ-DOMAIN 5-RELATED 1 415 - -
Pumo11g00399 461 MobiDBLite consensus disorder prediction 417 443 - -
Pumo11g00399 461 MobiDBLite consensus disorder prediction 103 124 - -
Pumo11g00399 461 Pfam IQ calmodulin-binding motif 132 151 IPR000048 GO:0005515
Pumo11g00399 461 MobiDBLite consensus disorder prediction 325 398 - -
Pumo11g00399 461 MobiDBLite consensus disorder prediction 417 435 - -
Pumo11g00399 461 MobiDBLite consensus disorder prediction 362 398 - -
Pumo11g00399 461 MobiDBLite consensus disorder prediction 41 63 - -
Pumo11g00399 461 ProSiteProfiles IQ motif profile. 130 158 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00399 Pumo-Chr11 14800598 14803853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00399 3 460 IQD Protein Family AT5G13460 44.025 8.95e-104 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00399 - - gmx:100794802 773.852