Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00389 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAGATAATGTTCTATTTTTGAATCCAGAGTCATCTAGCAGTTTTCAGGTTTCAACATCTGTGAACACAGTTGCTGAATTATGTAGGAGTACAAGCAGAACATGCACCCACACTCACACTTGCAACCCACCTGGCCCTGATGCTGCTCACACACACACATGCTATCACACACACACCCAAGTTTTTGCACCTGAAGATGATGACAGGGAGCACACCAACCCCAAATCAAAAAGGCCTTCTGGCAACCGAGAAGCGGTTAGGAAGTACAGGGAGAAGAAGAAGGCACACACAGCATACTTGGAGGAGGAAGTTAAGAAATTGCGTATGGTGAATCAGCAACTAGTGAGGAAACTACAAGGGCAGGCACTTCTTGAAGCAGAATTGGCAAGGTTGAGGAGCATTTTGGCACACCTTAAGGGGAAAATAGACAGACCATCATCCCAGGTCAACATTTGTGCTTATGGAAAATCCATGGTTCCATGGGATAGAAACTGCCAACCAGAAATTGTGGATTGTCAAGTGGATGCAAATAACATGACCAGTACTGAAGGACAAACTGTGGAAACAGTGGATAACTTCATATCATCTGCATCTCAAGACAGATAG 642 0.4424 MDDGNAELSDKLSDNVLFLNPESSSSFQVSTSVNTVAELCRSTSRTCTHTHTCNPPGPDAAHTHTCYHTHTQVFAPEDDDREHTNPKSKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRMVNQQLVRKLQGQALLEAELARLRSILAHLKGKIDRPSSQVNICAYGKSMVPWDRNCQPEIVDCQVDANNMTSTEGQTVETVDNFISSASQDR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00389 213 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 150 IPR004827 GO:0003700|GO:0006355
Pumo11g00389 213 MobiDBLite consensus disorder prediction 73 104 - -
Pumo11g00389 213 SMART brlzneu 77 149 IPR004827 GO:0003700|GO:0006355
Pumo11g00389 213 PANTHER CCAAT/ENHANCER BINDING PROTEIN 22 158 IPR031106 GO:0003700|GO:0006351
Pumo11g00389 213 CDD bZIP 87 141 - -
Pumo11g00389 213 Gene3D - 75 151 - -
Pumo11g00389 213 Pfam Basic region leucine zipper 87 139 IPR004827 GO:0003700|GO:0006355
Pumo11g00389 213 MobiDBLite consensus disorder prediction 73 100 - -
Pumo11g00389 213 SUPERFAMILY Leucine zipper domain 85 131 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00389 Pumo-Chr11 14491950 14492732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00389 39 199 bZIP Transcription Factor Family AT4G35040 45.506 3.09e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo11g00389 bZIP_2 1.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00389 K25785 - gmx:100527780 306.99