Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00377 ATGAGCAAAACCGGTTGTTATTGGGTTCTTCTACCCTTTCTTATCCTAATTTCTACTACTTTTGTTGCTGAAATTCATGGGAACAAACAAGGTCGAGCTCTTCAAAAGTTGCACAAGTCCAAGTTATTCAAAGCAAATTCCCAAATTGATGATAGTAGTCACTCTTTTGAGGCACAAGATCTTATTGTACATGATGTGGTGGTTCATTCTCAGTTAGGGTTAAAAGAGACAGACAGAATTAAGAAGCTGCCAGGGCAACCCCACCATGTGAAGTTCTCTCAGTATGGAGGATATGTCACGGTGGATAAATTGGCAGGGCGTGCCTTTTATTATTACTTTGTGGAAGCTCAACGCTCTAAAGAAAAATTGCCTCTTCTTCTTTGGCTCAACGGAGGCCCTGGTTGTTCATCTCTTGCCTATGGAGCTATGGAAGAACTTGGACCCTTCCGGGTAAACAGTGATGGGAAAACGCTACGCAAAAATAGATATTCGTGGAACTATGCTGCAAATATCTTGTTCCTCGAATCGCCTGCCGGTGTAGGATTTTCTTACTCGAACAGATCATCTGATTATGAAATCAATGGGGATAGGAAAACAGCAGCAGATAACTATGTGTTCTTAAGGAATTGGTTGGAGAGATTTCCTGAGTACAAGAATAGAGATTTCTACATTGCTGGGGAGAGCTATGCTGGGCATTATGTCCCTCAACTTGCACACAATATTCTCTACCATAACAAAAAGGCTAACAAGACAATCATCAACCTCAAAGGAATATTGATTGGGAATGCAGTGATCAATGAGGAAACAGACAACCGAGGAACATATGATTTTCTTGCTAGCCATGCAATCATCACTGATCAAACAGCACATGATATCAACAAATTCTGTGATTTCTCACGTCCCAATCAGAATAGTAAGTGCAAAGCAGCATTAGACAAAGTTGATAGTGATACTTCTGTCATTGATGCGTACAACATCTATGCTCCACTGTGCCATAGTACCAACCTCACTACCTTGCCAAAAATGAACTCGGTTGTTTTTGATCCATGTAGTGATAATTATGTGTATGCATATCTTAACCGGGGTGATGTTCAAGAGGCCTTACATGCCAATGTCACCAAACTCAAATACGATTGGGAGCCCTGTAGCAATGTCATTTCAGTGTGGGGGGATAGCCCTTCAACAATTATTCCCCTTTTACATGAATTCCTTAAAAATGAACTTAGGGTTTGGATTTTTAGTGGTGATATAGATTCAGTGGTACCTGTTACATCAACAAAGTATTCCATTAAAAAGATGAAGCTTAAAATTGAAACTGCTTGGCATCCTTGGTTCATATTAGGAGAGGTTGGTGGCTATACTCAAGTATATAAGGGAGGTTTGACTTTCGCCACAGTGAGGGAAGCAGGGCATCAAGTACCAAGCTACCAGCCAGCAAGAGCCTTTTCTCTAGTCAAACATTTTTTAGATGGCACTCCTCTTCCTAATACTAAAAAACATAACTAA 1506 0.4044 MSKTGCYWVLLPFLILISTTFVAEIHGNKQGRALQKLHKSKLFKANSQIDDSSHSFEAQDLIVHDVVVHSQLGLKETDRIKKLPGQPHHVKFSQYGGYVTVDKLAGRAFYYYFVEAQRSKEKLPLLLWLNGGPGCSSLAYGAMEELGPFRVNSDGKTLRKNRYSWNYAANILFLESPAGVGFSYSNRSSDYEINGDRKTAADNYVFLRNWLERFPEYKNRDFYIAGESYAGHYVPQLAHNILYHNKKANKTIINLKGILIGNAVINEETDNRGTYDFLASHAIITDQTAHDINKFCDFSRPNQNSKCKAALDKVDSDTSVIDAYNIYAPLCHSTNLTTLPKMNSVVFDPCSDNYVYAYLNRGDVQEALHANVTKLKYDWEPCSNVISVWGDSPSTIIPLLHEFLKNELRVWIFSGDIDSVVPVTSTKYSIKKMKLKIETAWHPWFILGEVGGYTQVYKGGLTFATVREAGHQVPSYQPARAFSLVKHFLDGTPLPNTKKHN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00377 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Pumo11g00377 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Pumo11g00377 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Pumo11g00377 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Pumo11g00377 501 FunFam Carboxypeptidase 74 333 - -
Pumo11g00377 501 Pfam Serine carboxypeptidase 84 491 IPR001563 GO:0004185|GO:0006508
Pumo11g00377 501 SUPERFAMILY alpha/beta-Hydrolases 80 495 IPR029058 -
Pumo11g00377 501 Gene3D alpha/beta hydrolase 74 333 IPR029058 -
Pumo11g00377 501 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 78 478 IPR001563 GO:0004185|GO:0006508
Pumo11g00377 501 Gene3D - 396 491 - -
Pumo11g00377 501 Gene3D - 350 386 - -
Pumo11g00377 501 FunFam Carboxypeptidase 347 494 - -
Pumo11g00377 501 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Pumo11g00377 501 FunFam Carboxypeptidase 396 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00377 Pumo-Chr11 14123596 14133272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00377 358 494 Calmodulin-binding Proteins AT2G22960 31.387 2.39e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00377 K16297 - gmx:100783864 724.931