Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00362 ATGGCAGCAGAGCTGGTGGGTGGGGCATTTCTGTCAGCCTCCTTTCAAGTGACTTTTGAAAGATTGGCTTCAAGTGACATCAAGGACTACTTCCGTGGAAGGAAACTCAAAGATGATATGCTCAAAAAGCTTGATATTACACTGAATTCCATCAACCAAGTGCTGGAGGATGCAGAGGAAAGGCAGTACAAAAGCCCAAATGTGATGAAGTGGCTTGATGAGCTTAAAGAAGCTATATATGAAGCAGAGTTGCTGTTAGACGAGGTTGCTACAGAGGCATCGCGACAAAAGCTGGAAGCTGAATTTCAGCCAGCTACTAGCAAGGTGCGAGGCTTCTTCATGGCTTTTATTAATCCATTTGACAAAGAAATTGCATCTAGGGTCAAAGAATTACTAGAGAACATAAAATTTCTGGCAGAGCAAAAGGATATGCTAGGATTGAGAAAGGGAATTTGTGCTGGCAATGAAGTTGGAGTCAGTTCAAAACTCTCCAACAGATTGCCAACTACATCCTTGGTGGACGAATCTAGCATATGTGGTAGAGAGAGTGATAAAGAGGAAATAATCAAAATTTTACTTTCAGACAATGTCACATGCAATCAGGTGCCAATAGTTAGTATAGTGGGTATGGGAGGGATGGGTAAGACCACCCTTGCTCAGCTTGTGTATAATGACCAAAGGGTACTGGATCAATTTGACCTTAAAGCTTGGGTCTATGTTTCACAAGATTTTGATGTTGTTGCTGTCACAAAAGCAATTCTTAAGGCTCTTCGGTCCTTAGCAGCAGAAGAAAAAGACTTGAATTTGCTTCAACTTGAATTGAAGCAAAGACTGATAGGAAAGAAATTTTTGCTTGTTTTAGATGATGTTTGGAACGAAAACTATTCAAGTTGGGAGGTACTACAAATCCCCTTCATTTATGGATCTTCAGGAAGTAGGATTCTTGTTACCACTCGTAATGAGAAGGTAGCATCAGTCATGAACTCCTCCCAAATTCTTCATTTAAAGCCACTGGAGAAAGAAGATTGTTGGAAGCTATTTGCAAATCTTGCATTTCATGACAAGGATGCCAGCAAATATCCAAATCTTGTATCAGTTGGCACTAAAATTGTTGACAAGTGTGGAGGATTGCCTTTAGCCATAAAAACATTGGGAAATATCTTGCGAGCAAAATTCTCCCAGCCCGAATGGGTTAAGATATTGGAAAGTGATATGTGGCACTTATCAGACAATGATGGCAGCATTAACCCTGCTCTTAGATTGAGTTACCACAATCTTCCTTCCTATCTGAAGCGCTGTTTTGCTTATTGCTCCATATTTCCCAAAGGTTATGAGTTTGACAGGGATCAGTTAATCCAGTTGTGGATGGCAGAAGGTTTGTTGAATTGCTGCCAAATAGATAAGAGTGAAGAAGAGTTAGGTCGTGAGTTCTTCAATGATCTAGTGGCAAGGTCATTTTTCCAACAATCAAGGCGCCATGGTTCAAGCTTTACCATTCATGATCTTCTTAATGATTTAGCGAAATCTATGTCAGGAGATTTTTATTTACAAATGGAGGGTAATTTGGTACAAGACATACCTAAAAGAGCTCGTCACATTTCATACTCTCATAAATTTAACCTTGATGATAAAGTTTTGGAGCTTATTTGCAAGTGTAAAAGACTGCGTTGTTTCATTGTACTCGATATGAATCTTGACCGTGGTGGAGACTTGATGATGAATAGCAATATACAACGTGTTTTGTTTTCAAGACTAAAATATTTGCGCTTGTTATCCTTCAAAAGTTGTCTCCTCACAGAGTTAGTTGATGATATAAGCAATCTAAAGCTTTTGCGTTATCTTGACCTTTCATACACCAAGATCAAAAGATTGTCTGACTCCATTTGTATGCTGCATAATTTAGAGACACTATTACTAGTATGGTGCTATCATTTGACAGAGCTCCCCTCAGATTTGCACAAACTTGTCAACTTGCGTCATCTTGATGTTCGTATGAGCGGAATAAATAAGATGCCAAACCACATAGGAAGGCTGAAACATCTTCAGACCCTGACTTGTTTTCCCATCAGGAAGCATAGTGGGTTTGATGTTAAGGAGTTGGGCAATCTCAACAATCTCCAAGGAACACTTTCAATTTTCAAGTTAGAAAATGTCACTGATCCTGTGGATGCCATGGAAGCCAATATGAAACATAAAAAGCATTTAGAAGGATTAGTGTTGGATTGGGGTGACAAATTTGGAAGGTGCAATGAAAATGAGGACTCAATAATAGAAAGGCATGTGTTAGAGGCTCTTCAACCAAATGAGAACTTGAAAAAGCTTACTGTTTTGCGTTATGATGGAACTACCTTTCCAAGTTGGTTTGGAGGTTCTCATTTACCCAATTTAGTGTCTATTACGCTGACTGAAAGTAAATTCTGTTTTATCTTGCCACCATTTGGGCAGCTCCCATCACTGAAGGAGCTTTCGATATCATGCTTTTATGGGATTGAGGTCATTGGTCCTGAGTTTTGTGGTAATGATTCCTCAAATGTTCCATTCAGGTCTCTTGAAATTTTGAAATTTGAGGAAATGAGTGCATGGAAAGAATGGTGCAGTTTTGAAGGTCAGAGTGAAGGTGAAGGTTTGTCTTGTCTTAAAGAGCTTTCTATAAGGCGCTGTCCTTGGTTGAGAAGGTCCCTGCCCCAACACCTACCTTCTTTGCAGAAATTGGTAATTTATGAATGCCAACACTTAGAGGATTCCGTTCCCAAGGCTGCTAGTATTCATGAGGTAGAGTTGAGTAGATGTGAAAAAATTTACCTGAAAGATTCGCCATCCAGCTTGAAAAAGGCCACAATTCAGGGAACTCGTGTCATTGAGTCCTGCCTGGAGCAAGTTATGCTCAACAATACCTTTCTTGAAGAGTTGACAATACACGACTTCCATGGTCCAACTCTAAAATGGTCCTTGTTGGATTTGCATAGACATGATTCACATGGCACTCTATCTATAGCAAGCTTGTTTGCTAATCTTCATTCTCTACATTTCTATGATTGTCCACAGCTTGAGTCATTTCCCAAGGGGGGTTTGCCTTCAAGCCTGCACAGACTCAAAATCGATGGTTGCCCCAAACTGGTTGCTTCTAGGGAGGAGTGGGGATTGTTCAAACTCCATTTTCTGAAAGAGTTTTGGGTTAGTGATGACTTTGAAAACGTGGAGTCTTTCCCAGAGGAGAGGTTGCTACCACCCACTCTCACTGGTCTCTACTTAATTGGATGTTCAAAGCTGACAACAATAAACTCTATGGGTTTTCTCCACCTCAAATCTCTCAAATCCTTATATATTCTCGGTTGCCCTCATCTTCAGTGCTTGCCAGAAGAGGATCTACCCAACTCTCTTTCTGTTCTGTTCATTTGCTGTTGCCCTTTGCTTGAGCAGCGGTACAAAAAGGATGGAGAGCATTGGCATAAAATTCTCCACATCCCTTCTGTGATGATTGATTAA 3486 0.4028 MAAELVGGAFLSASFQVTFERLASSDIKDYFRGRKLKDDMLKKLDITLNSINQVLEDAEERQYKSPNVMKWLDELKEAIYEAELLLDEVATEASRQKLEAEFQPATSKVRGFFMAFINPFDKEIASRVKELLENIKFLAEQKDMLGLRKGICAGNEVGVSSKLSNRLPTTSLVDESSICGRESDKEEIIKILLSDNVTCNQVPIVSIVGMGGMGKTTLAQLVYNDQRVLDQFDLKAWVYVSQDFDVVAVTKAILKALRSLAAEEKDLNLLQLELKQRLIGKKFLLVLDDVWNENYSSWEVLQIPFIYGSSGSRILVTTRNEKVASVMNSSQILHLKPLEKEDCWKLFANLAFHDKDASKYPNLVSVGTKIVDKCGGLPLAIKTLGNILRAKFSQPEWVKILESDMWHLSDNDGSINPALRLSYHNLPSYLKRCFAYCSIFPKGYEFDRDQLIQLWMAEGLLNCCQIDKSEEELGREFFNDLVARSFFQQSRRHGSSFTIHDLLNDLAKSMSGDFYLQMEGNLVQDIPKRARHISYSHKFNLDDKVLELICKCKRLRCFIVLDMNLDRGGDLMMNSNIQRVLFSRLKYLRLLSFKSCLLTELVDDISNLKLLRYLDLSYTKIKRLSDSICMLHNLETLLLVWCYHLTELPSDLHKLVNLRHLDVRMSGINKMPNHIGRLKHLQTLTCFPIRKHSGFDVKELGNLNNLQGTLSIFKLENVTDPVDAMEANMKHKKHLEGLVLDWGDKFGRCNENEDSIIERHVLEALQPNENLKKLTVLRYDGTTFPSWFGGSHLPNLVSITLTESKFCFILPPFGQLPSLKELSISCFYGIEVIGPEFCGNDSSNVPFRSLEILKFEEMSAWKEWCSFEGQSEGEGLSCLKELSIRRCPWLRRSLPQHLPSLQKLVIYECQHLEDSVPKAASIHEVELSRCEKIYLKDSPSSLKKATIQGTRVIESCLEQVMLNNTFLEELTIHDFHGPTLKWSLLDLHRHDSHGTLSIASLFANLHSLHFYDCPQLESFPKGGLPSSLHRLKIDGCPKLVASREEWGLFKLHFLKEFWVSDDFENVESFPEERLLPPTLTGLYLIGCSKLTTINSMGFLHLKSLKSLYILGCPHLQCLPEEDLPNSLSVLFICCCPLLEQRYKKDGEHWHKILHIPSVMID 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00362 1161 Gene3D - 337 427 IPR042197 -
Pumo11g00362 1161 FunFam Probable disease resistance protein At1g61300 162 331 - -
Pumo11g00362 1161 Coils Coil 41 61 - -
Pumo11g00362 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 437 IPR027417 -
Pumo11g00362 1161 Pfam Rx N-terminal domain 10 102 IPR041118 -
Pumo11g00362 1161 Coils Coil 72 92 - -
Pumo11g00362 1161 Gene3D - 16 129 - -
Pumo11g00362 1161 PRINTS Disease resistance protein signature 204 219 - -
Pumo11g00362 1161 PRINTS Disease resistance protein signature 374 388 - -
Pumo11g00362 1161 PRINTS Disease resistance protein signature 277 291 - -
Pumo11g00362 1161 PRINTS Disease resistance protein signature 606 622 - -
Pumo11g00362 1161 Gene3D - 160 334 IPR027417 -
Pumo11g00362 1161 Gene3D - 429 509 IPR036388 -
Pumo11g00362 1161 Gene3D Ribonuclease Inhibitor 978 1140 IPR032675 -
Pumo11g00362 1161 FunFam Probable disease resistance protein At1g63360 423 509 - -
Pumo11g00362 1161 PANTHER DISEASE RESISTANCE PROTEIN RP 45 887 IPR044974 GO:0006952
Pumo11g00362 1161 Pfam NB-ARC domain 182 403 IPR002182 GO:0043531
Pumo11g00362 1161 SUPERFAMILY RNI-like 792 1138 - -
Pumo11g00362 1161 Gene3D Ribonuclease Inhibitor 540 954 IPR032675 -
Pumo11g00362 1161 SUPERFAMILY L domain-like 499 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00362 Pumo-Chr11 13533628 13537352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00362 205 709 WRKY Transcription Factor Family AT5G45050 23.818 1.93e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00362 - - gmx:100777510 1950.25