Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00347 ATGGCAGCTGTGGTGGTGGGTGGGGCATTTCTCTCAGCCTCTCTTCAAGTGACTTTTGACAGGTTGGCTTCAAGTGACATCAAAGACTACTTCCATGGAAGGAAACTCAAGGATGAGATGCTCAAAAAGCTTTGTATTGTGCTGAACTCTATCAACCAAGTGTTGGAGGATGCTGAAGAAAGGCAGTACAAAAGCCCAAATGTTATGAAGTGGCTTGATGAGCTTAAAGAGGATATATATGAAGCAGAGTTGCTGTTAGACGAGGTTGCTACGGAGGCATCGCGACAGAAGCTGGAAGCTGAATTTCAGCCTGCTACTAGCAAGGTGCGAGGCTTTTTCACGGCTTTTATTAATCCATTTGACAAAGAAATTGCATCTAGGGTCAAAGAATTACTAGAGAACATAAAATTTCTGGCAGAGCAAAAGGATATGCTAGGATTGAGAAAGGGAATTTGTGGTGGCAATGAAGTTGGAGTCAGTTCAAAATTCTCCAACAGATTACCAACTACATCCTTGGTGGACGAATCTAGCATATGTGGTAGAGAGAGTGATAAAGAGGAAATAATCAAAATTTTACTTTCAGACAATGTCACATGCAATCAGGTGCCAATAGTTAGTATAGTGGGCATGGGAGGGATGGGTAAGACCACCCTTGCTCAGCTCTTGTATAATGACCAAAGGATACTGGATCATTTTGACCTTAAAGCTTGGGTCTATGTTTCACAAGATTTTGATGTTGTTGCTGTCACAAAAGCAATTCTAAAGGCACAGTCTGTAGCAGCAGAAGAAAAAGACTTAAATCTGCTTCAACTTGAACTGAAGCAGAGACTGATGGGGAAGAAATTTTTGCTTGTTTTAGATGATGTTTGGAACGAAAACTATTCAAGTTGGGAGGTACTACAAATCCCCTTCATTTATGGATCTTCAGGAAGTAGGATTCTTGTTACCACTCGTAATGAGAAGGTAGCATCAGTCATGAACTCCTCCAAACTACTTCGTTTAAATCCACTGGAGAAAGAAGATTGTTGGAAGCTATTTGTGAGTCTTGCATTTCATGACAAGGATGCCAGCAAATATCCAAATCTTGTATCAGTTGGCAGTAAAATTGTTGACAAGTGTGGAGGATTGCCTTTAGCTATAAAAACATTGGGAAATATCTTGCGAGCAAAATTCTCCCAGCATGAATGGGTTAAGATATTGGAAAGTGATATGTGGCACTTATCAGACAATGATAGCAGCATTAACCCTGCTCTGAGATTGAGTTACCACAATCTTCCTTCCTATCTGAAGCGCTGTTTTGCTTATTGCTCCATATTTCCCAAAGGTTATGAGTTTGACAGGGACCAGTTAATCCAGTTGTGGATGGCAGAAGGTTTGTTGAATTGCAGCCAAATAGATAAGAGTGAAGAAGAGTTAGGTCGTGAGTTCTTCAATGATCTAGTGGCAAGGTCATTTTTACAACAATCAAGATGCCGTGGTTCTCGCTTCATTATGCATGATCTTCTTAATGATTTAGCAAAATCTGTCTCAGGAGAATTTTGCTTACAAATAGAGGGCAATTTGGAGAAAGAAATCACAAAGAGAACACGTCACATTTCATGCTCTCACAAATTTAACCTTGATGACAAATTTTTGGAGCATATTTGTATGTGTAACAGATTGCGTTGTCTAATGGCACTCAAATGGGAACTTGGCAGAGGAGGCTTGATGGACAGCAATAAACAATGTGTTTTGTTTTCTAGACTAAAATATTTGCGCGTGTTATCCTTCAATAATTGTCTTCTCACAGAGTTAGTTGATGATATAAGCAATTTAAAGCTTTTGCGTTATTTAGATCTTTCGTACACTAAGATTAAAAGATTGCCTGACTCCATTTGTAAGCTGCATAATTTGCAGACACTATTACTGGTATGGTGCTATCATTTGACACAGCTTCCCTCAGATTTGCACAAACTTGTCAACTTGCGTCATCTTGATGTTCATATGAGCGGAATAAATAAGATGCCAAACCACATAGGAAGGCTGAAACATCTTCAGACCCTGACTAGTTTTTTCATCAGGAAGCATAGTGGGTTTGATGTTAAGGAGTTGGCGAATCTCAACCATCTCCAAGGAACACTTTCAATTTTGAAGTTAGAAAATGTCACTGATCCTGTGGATGCCATGGAAGCTAATATGAAAGGAAAAATGCATTTAGAAGGATTAGTGTTGAATTGGGGTGACAAATTTGGAAGGAGCAATGAAAATGAGGACTCAATAATAGAAAGACACGTGTTAGAGGCTCTTCAACCAAATGGGAACTTGAAAAAGCTTACTGTTTTACGTTATGATGGAACTAGCTTTCCAAGTTGGTTTGGAGGTTCTCATTTACCCAATTTAGTATCTATTACGCTGAATGAAAGTAAATTCTGTTTTATCTTGCCACCGTTTGGGAAGCTTCCCTCTCTGAAGGAGCTTTCTATTTCATGCTTTTATGGAATAGAGGTCATTGGTCCTGAGTTTTGTGGTAATGATTCCTCAAATATTCCATTCAGATCTCTTGAAATTTTGAAGTTTGAGGAAATGAGTGCGTGGAAAGAATGGTGCAGTTTTGAAGGTCATAGTGAAGGTGAAGTTTTGCCTCGTCTTAAAGAGCTTTCTATAAAGCGCTGTCCTTGGTTGAGGATGGCCCTGCCTCATCACCTTCCTTCTTTGCATAAATTAGTAATTTGTGAATGCCAAAACTTAGAGGATTCAGTTCCCAAGGCTGCTGTTATTCTTGAGCTAGAGTTGCGTAGATGTGAAAAATTTTTGCAGAAAGATTTGCCATCCAGCTTGAAAAAGGCCAAAATTCATGGAACTCACGTCATTGCGTCCTGCCTCGAACAAATTCTGCTCAACAATGCCTTTCTTGAAGAGTTGGAAATACATGACTTCCATTGTCCAAATCTAAAATGGTCCTCTTTGGATTTGCATAGACATGATTCTCTTGGCACTCTATCCATAACAAGCTGGTACTCCTCCTCATTGCCTTTTGCACTAGACTTCTTTGTCAATCTTCATTCTCTACATTTCAATGATTGTCCGCAGCTCGAGTCTTTTCCCAAGGGGGGTTTGCCTTCAAGCCTGCGCAAACTCGAAATTGAGGGTTGCCCCAAACTGGTTGCCTCTAGGGAGGAGTGGGGATTGTTCAAACTCCATTCTCTGAAAGAGTTGATGGTAAGTGATGACTTTGAAAACGTGGAGTCTTTCCCAGAGGAGAGGTTGCTACCACCCTCTCTCAGTGATCTCTACTTAACTGAATGTTCAAAGCTAACAACAACAAACTCTATGGGTTTTCTCCACCTCAAATCTTTCAAATCCTTCTATATTCTCAGTTGCCCTCGTATTCAGGGCTTGCCAGAAGCAGCTTTACCCAACTCTCTTTCTGTTCTGTGTATTCATGATTGCCCTTTACTTGAGCAGCGGTACCAAAAGGATGGAGAGCATTGGCATAAAATTCACCACATCCCTTCTGTGATGATTACTTAG 3510 0.4017 MAAVVVGGAFLSASLQVTFDRLASSDIKDYFHGRKLKDEMLKKLCIVLNSINQVLEDAEERQYKSPNVMKWLDELKEDIYEAELLLDEVATEASRQKLEAEFQPATSKVRGFFTAFINPFDKEIASRVKELLENIKFLAEQKDMLGLRKGICGGNEVGVSSKFSNRLPTTSLVDESSICGRESDKEEIIKILLSDNVTCNQVPIVSIVGMGGMGKTTLAQLLYNDQRILDHFDLKAWVYVSQDFDVVAVTKAILKAQSVAAEEKDLNLLQLELKQRLMGKKFLLVLDDVWNENYSSWEVLQIPFIYGSSGSRILVTTRNEKVASVMNSSKLLRLNPLEKEDCWKLFVSLAFHDKDASKYPNLVSVGSKIVDKCGGLPLAIKTLGNILRAKFSQHEWVKILESDMWHLSDNDSSINPALRLSYHNLPSYLKRCFAYCSIFPKGYEFDRDQLIQLWMAEGLLNCSQIDKSEEELGREFFNDLVARSFLQQSRCRGSRFIMHDLLNDLAKSVSGEFCLQIEGNLEKEITKRTRHISCSHKFNLDDKFLEHICMCNRLRCLMALKWELGRGGLMDSNKQCVLFSRLKYLRVLSFNNCLLTELVDDISNLKLLRYLDLSYTKIKRLPDSICKLHNLQTLLLVWCYHLTQLPSDLHKLVNLRHLDVHMSGINKMPNHIGRLKHLQTLTSFFIRKHSGFDVKELANLNHLQGTLSILKLENVTDPVDAMEANMKGKMHLEGLVLNWGDKFGRSNENEDSIIERHVLEALQPNGNLKKLTVLRYDGTSFPSWFGGSHLPNLVSITLNESKFCFILPPFGKLPSLKELSISCFYGIEVIGPEFCGNDSSNIPFRSLEILKFEEMSAWKEWCSFEGHSEGEVLPRLKELSIKRCPWLRMALPHHLPSLHKLVICECQNLEDSVPKAAVILELELRRCEKFLQKDLPSSLKKAKIHGTHVIASCLEQILLNNAFLEELEIHDFHCPNLKWSSLDLHRHDSLGTLSITSWYSSSLPFALDFFVNLHSLHFNDCPQLESFPKGGLPSSLRKLEIEGCPKLVASREEWGLFKLHSLKELMVSDDFENVESFPEERLLPPSLSDLYLTECSKLTTTNSMGFLHLKSFKSFYILSCPRIQGLPEAALPNSLSVLCIHDCPLLEQRYQKDGEHWHKIHHIPSVMIT 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00347 1169 SUPERFAMILY L domain-like 954 1161 - -
Pumo11g00347 1169 Gene3D - 160 332 IPR027417 -
Pumo11g00347 1169 Gene3D - 15 129 - -
Pumo11g00347 1169 PRINTS Disease resistance protein signature 276 290 - -
Pumo11g00347 1169 PRINTS Disease resistance protein signature 603 619 - -
Pumo11g00347 1169 PRINTS Disease resistance protein signature 204 219 - -
Pumo11g00347 1169 PRINTS Disease resistance protein signature 373 387 - -
Pumo11g00347 1169 Coils Coil 41 61 - -
Pumo11g00347 1169 Gene3D - 428 508 IPR036388 -
Pumo11g00347 1169 Coils Coil 72 92 - -
Pumo11g00347 1169 Gene3D - 336 426 IPR042197 -
Pumo11g00347 1169 Pfam Rx N-terminal domain 10 102 IPR041118 -
Pumo11g00347 1169 SUPERFAMILY L domain-like 498 911 - -
Pumo11g00347 1169 Pfam NB-ARC domain 182 422 IPR002182 GO:0043531
Pumo11g00347 1169 PANTHER DISEASE RESISTANCE PROTEIN RP 35 921 IPR044974 GO:0006952
Pumo11g00347 1169 FunFam Probable disease resistance protein At1g63360 422 508 - -
Pumo11g00347 1169 Gene3D Ribonuclease Inhibitor 550 950 IPR032675 -
Pumo11g00347 1169 Gene3D Ribonuclease Inhibitor 952 1163 IPR032675 -
Pumo11g00347 1169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 436 IPR027417 -
Pumo11g00347 1169 FunFam Probable disease resistance protein At1g61300 163 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00347 Pumo-Chr11 12858700 12863018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00347 205 543 WRKY Transcription Factor Family AT5G45050 26.149 2.53e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00347 - - gmx:100777510 2001.48