Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00346 ATGGATTCACCTACAATATTTGACTTCTCAACCATCTCTCATGCCACAAATCACTTTTCAGACAGTAACAAATTAGGAGAAGGTGGTTTTGGACCAGTCTATAAGGGTGTATTGGCAGATGGGCGGGAGATTGCTGTCAAGAGGCTATCTGAAACTTCTACACAAGGAACAAAAGAGTTCAAAAATGAAATGATGTTGATGGCAACACTTCAGCACCGTAATCTTGTAAAACTTCTTGGTTGTTCCATTCAACAGATGAAAAGCTGTTGA 270 0.3963 MDSPTIFDFSTISHATNHFSDSNKLGEGGFGPVYKGVLADGREIAVKRLSETSTQGTKEFKNEMMLMATLQHRNLVKLLGCSIQQMKSC 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00346 89 ProSiteProfiles Protein kinase domain profile. 19 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00346 89 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 85 - -
Pumo11g00346 89 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Pumo11g00346 89 FunFam Os08g0179000 protein 1 88 - -
Pumo11g00346 89 SUPERFAMILY Protein kinase-like (PK-like) 3 85 IPR011009 -
Pumo11g00346 89 Pfam Protein tyrosine and serine/threonine kinase 22 86 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00346 Pumo-Chr11 12844406 12844756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00346 7 84 Receptor kinase-like Gene Family AT4G38830 70.513 2.84e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00346 PK_Tyr_Ser-Thr 4.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00346 - - gmx:100819820 144.821