Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00345 ATGCGAAGCAAAATGCTAGATTGGACTAAGCGCTTTCAAATTATTGATGGAATTGCTCGTGGGCTTCTTTATCTTCATCAAGACTCTAGATTAAGAATCATCCATAGAGATATCAAAGCTAGCAACATTCTTCTAGATAACGATATGATCCAAAGATATCAGATTTTGGTTTGGCTAAAACATTTGGAGATCAAGCTGAGGCCAAAACCAACAGATGGTTATATGTCTCCAGAATATGCAGTACGTGGATCTTTTTCATTCAAATCTGACATTTTTAGCTTTGGTGTCATTGTACTTGAGATAATTAGCGGAAGGAAGAATCGTGAATTTTGCGACCCTAACCATCATCATAATCTTCTTGGTCATGCATGGAAGCTATGGGTAGAAGAAAGGCCCTAG 399 0.3784 MRSKMLDWTKRFQIIDGIARGLLYLHQDSRLRIIHRDIKASNILLDNDMIQRYQILVWLKHLEIKLRPKPTDGYMSPEYAVRGSFSFKSDIFSFGVIVLEIISGRKNREFCDPNHHHNLLGHAWKLWVEERP 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00345 132 SUPERFAMILY Protein kinase-like (PK-like) 3 125 IPR011009 -
Pumo11g00345 132 Pfam Protein kinase domain 13 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00345 132 Gene3D Transferase(Phosphotransferase) domain 1 1 132 - -
Pumo11g00345 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00345 132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 33 45 IPR008271 GO:0004672|GO:0006468
Pumo11g00345 132 FunFam Os07g0541700 protein 1 71 - -
Pumo11g00345 132 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00345 Pumo-Chr11 12843182 12844264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00345 2 127 Receptor kinase-like Gene Family AT4G23230 55.303 4.61e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00345 Pkinase 4.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00345 - - tpra:123915364 185.267