Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00344 ATGCTCAACGTCTATGACATGTCGATGTACACCGTGCTGGAGATCCTCTGTCACTTCGAAAGTCCTCCATCTCCGAACACCACACGTGTTGTCCCCATCATTGTCTCGGCGGTACTCCTTTCATTTTGCTGCTATTCGCGTTGGAGAAAAACAAGCAAAATTGGTCAACAAAGTATCACTTTAGAGGGATTGCAATTCGATTTGATTAAAATTAAAGCAGCAACAAATGATTTCTCACACGAGAATAAGATTGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGTATTCTCTGTGATGGACGACATATAGCTGTTAAGAGACTTTCAACAAGTTCTAAGCAAGGTTCAACTGAGTTCAAGAATGAGATTTTATTAATAGCCAAGCTACAACATAGAAATCTCGTGGCATTTATAGGTTTTTGCTTAGAAGATCAAGAGAAAATTCTTATTTATGAATACATGCCAAATGGGAGCCTCAATTACCTTTTATTTGTTATACATCGTGATCTTAAACCTAGTAATGTTCTATTAGATGAAAATATGAACCCTAAAATATCAGATTTTGGCATGGCTAGAATTGTTGAAATGGATCAAGATCGTGGAAATACTAGTAGAATTGTCGGAATATATGGCTATATGTCACCAGAATATGCAATGTTTGGACAATTTTCTGAAAAGTCAGATGTGTTTAGCTTTGGTGTCATGGTTCTCGAGATTATTACAGGAAAAAGGAGTGTGAATGTTTATGAATCACACAATGTCGTGGAGGGCCTCACCAGCTATGCGAGTTTGGAGACAATGGAAGAATCAAGAACCATTAAGCATCTTGGATTCAAACATAAAAGAAAGATATTCACCGATGGAAGTTCTTAG 873 0.3746 MLNVYDMSMYTVLEILCHFESPPSPNTTRVVPIIVSAVLLSFCCYSRWRKTSKIGQQSITLEGLQFDLIKIKAATNDFSHENKIGKGGFGEVYKGILCDGRHIAVKRLSTSSKQGSTEFKNEILLIAKLQHRNLVAFIGFCLEDQEKILIYEYMPNGSLNYLLFVIHRDLKPSNVLLDENMNPKISDFGMARIVEMDQDRGNTSRIVGIYGYMSPEYAMFGQFSEKSDVFSFGVMVLEIITGKRSVNVYESHNVVEGLTSYASLETMEESRTIKHLGFKHKRKIFTDGSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00344 290 Gene3D Transferase(Phosphotransferase) domain 1 164 279 - -
Pumo11g00344 290 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 30 164 - -
Pumo11g00344 290 Pfam Protein kinase domain 164 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00344 290 Pfam Protein tyrosine and serine/threonine kinase 80 162 IPR001245 GO:0004672|GO:0006468
Pumo11g00344 290 SMART serkin_6 78 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00344 290 Gene3D Phosphorylase Kinase; domain 1 40 153 - -
Pumo11g00344 290 FunFam Os07g0541700 protein 151 209 - -
Pumo11g00344 290 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 46 153 - -
Pumo11g00344 290 ProSiteProfiles Protein kinase domain profile. 78 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00344 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pumo11g00344 290 SUPERFAMILY Protein kinase-like (PK-like) 66 247 IPR011009 -
Pumo11g00344 290 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00344 Pumo-Chr11 12712161 12714364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00344 30 255 Receptor kinase-like Gene Family AT4G23230 51.301 4.00e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00344 Pkinase 9.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00344 - - gmx:100785282 393.275