Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00334 ATGAAGCAGCCAATCATTGCAGGGTGGCATTTTACAGATGGATGTGGATATGAATATGAATTGATAGCACGGATAGTTGACATGGTGGGTATGTCAAAACACAATTTTTTACCTGTTAATGGACATCTAGTTGGACTTGAGACTCGTCTACCTAAAATAATATTTCGTTTGCAAATCTCTGCTCCCACTGTCATCATGGTGGGAATATGTGGAGTTAGTGGAATAGGTAAAAGCCATTCGGCTCAAGCTTTGTATAATTCCATCAGTGAACAATTTGAAGGTTCATGCTTTCTCAGTGATGTCAGAGGAAGTTCAGCCAAATATGGGTTAGCATATCTCCAAGAGGCAATTCTTTCTGATATAGATGGTGAGAATATCAAGGTGGTTCATGAGCATAAAGGAATTCCAATCCTGATTAGGAAGTTGCAAGGCAAAAGGGTTCTTTTGATACTTGATAATGTGGACAAGCTGGAGCAATTGGAGTATTTAGCAGGAGAATGCAATTGGTTTGGTTTGGGCAGTAGAATTATCATAACTAGCAGGTGTAAAGATCTTTTAGCTGCTCATGGAGTTGAAAATATATATGATGTACCAAAATTAGGTAACTATGAAGCTATGCAACTTCTAAGTTCCAAGGCATCCGAGGGACCCAAACCTGATTACTATAATGCGGTTTGTGAACGTGCATTTCACTGTTCCCATGGCCTTCCATTGGTTTTGAAGGTTATGGGTTCTGATTTGTCAGAAACAATGGAGGTTATTGGTCCTGATTTGTCAGAAACATCAAAACATGAATTGGAGATCGCATTAGACAGATATGAACAAGTTTGTAATGGAGAAATTCAGGGTATACTTAAAGTGAGTTATGATAGTTTAAATGAATGTGAGAAGAGAATTTTCCTTGACATTGCATGTTTCTTCATTGGAGAGCCACTATCATATGTTGAGGAAATACTATCAGCTTGTGGTTTCAATCCAAAATATAGTATTAGCAGACTTATTGGTAGATCTCTCCTATCTATTGCTCCTAGTGGAAGGTTGATGATGCATGACTATATGAAAGACATGGCCATGAAAATAGTGCAACGGGAATCACCCCTGCATCCAGGAAAACGAAGTAGATTATGGTGCCCTCAAGATGTTCTCAAAGTTTTAAATGAAAATGAGGGATCTGACAAAATTGAAGTTATGATGTTGGTTGACTTACCACGAGGAAATGATGTACTGAAGTTGAGTGACAAAGCCTTCAAAAATATGAAAAGCCTGAGAATATTAATTATTAAGGATGCCATATATTCTGGAGTCCCCCAATATCTCTCAAATAGCATGAGAGTTCTGATATGGAGTGGATATCCTTCAAGGTGTTTACCACCTGATTTTCTCAAATTGCCTTCTGATTGTCTCATTTTGAACAAGTTCAAGAATATGGAGCGTTTGACTAAAATGGATTTCACTGATTGTGAATTTTTGTCAGAAGTACCTGACATTTCGGGAATCCCACTCTTAAGGATATTGTATCTAGATAATTGTATAAATTTGATTAAGATTCATGATTCTGTTGGATTTCTTGGTAATCTTGAAGAGCTGATTGCAACAGGATGCACTAGTCTGAAAATAATTCCATCAGCATTCAAGTTGGCATCTCTTAGAGAGCTCTCTTTCTCTGAGTGCTTGAGACTTGTGAGGTTTCCAGAAATAGTGTGTGAGATAGAAAATTTGAAGTATCTCAACTTGTGGCAAACTGCCATAGAGGAATTACCATTTTCTATTGGAAATCTTAGAGGGCTTGAATCTTTAAATCTAATGGAATGTGCTAGGCTTGATAAGCTACCCAGTAGCATTTTTACACTACCAAGACTTCAGGAAATTCAAGCTGACTCATGTAGAAGGTTTGACATTTCTGTTGAGTGTGAAGATCATGGACAACTGAGATTATTAACTGCTTCTCCAAACATTGTTCATCTGTATCTGAGCTCTTGCAACTTAACAACTGAACATCTTGTTATATGTCTCAGTGGTTTTGCCAATGTGGTATATTTGGACCTATCTTACAATAGTTTTGCAGTCCTTCCAGCATGCATTAAAGAATGTATACATTTGAAGACTCTTCTGCTGAGCAATTGCAAGCAACTTCAAGACATTTTAGTCATTCCCCCTAAATTAAAAGACATAGATGCATTGAACTGCACATCATTGACATCCCAGTCATCAAGTGTACTATTGAGCCAGGCAATTCATGGAACTGGGCAGAAAACTGTAATTCTTCCAGGGTCCAGGATTCCAGAATGGTTTGATCATTGTAGCAGTGAAAGGTCCATAACCTTTTGGGGTCGTGAGAGATTCCCAAGGATTTGTGTGTGTGTCTCTTTTGGAATGTTGGAAAATCCACTGCACCATTTTCAAGTTGCATTATTCTGTATAGTCATCAACGGCCACAAAAGGATATTGTCCAAACATTGTTACGATTGGTCAATGGAGACAGATCATCTGTGGCTATTTGATCTAACTGCCCTTATTAGTCATGAAGATCTCAGAGGAAGATTTGTGAAGAGTGATTGGAATCATGTGGAGATTGAAATGGAATGGAATTCCTGTATACAAGGTGACCATGGACCAACAAGAATGGCTATTGTGAAATGGTATGGAATTCACATATACAGGCAGGAAAGTAAAATGGAGGATATTTCTTTCACAAAACCGAGAAATCTACAAGAAAATAATACAAGTAAAAGGGTTGGTAGTGAGATTTTGGATTTGGAGAAACGTCAAAAGAGAAGTTGA 2781 0.3783 MKQPIIAGWHFTDGCGYEYELIARIVDMVGMSKHNFLPVNGHLVGLETRLPKIIFRLQISAPTVIMVGICGVSGIGKSHSAQALYNSISEQFEGSCFLSDVRGSSAKYGLAYLQEAILSDIDGENIKVVHEHKGIPILIRKLQGKRVLLILDNVDKLEQLEYLAGECNWFGLGSRIIITSRCKDLLAAHGVENIYDVPKLGNYEAMQLLSSKASEGPKPDYYNAVCERAFHCSHGLPLVLKVMGSDLSETMEVIGPDLSETSKHELEIALDRYEQVCNGEIQGILKVSYDSLNECEKRIFLDIACFFIGEPLSYVEEILSACGFNPKYSISRLIGRSLLSIAPSGRLMMHDYMKDMAMKIVQRESPLHPGKRSRLWCPQDVLKVLNENEGSDKIEVMMLVDLPRGNDVLKLSDKAFKNMKSLRILIIKDAIYSGVPQYLSNSMRVLIWSGYPSRCLPPDFLKLPSDCLILNKFKNMERLTKMDFTDCEFLSEVPDISGIPLLRILYLDNCINLIKIHDSVGFLGNLEELIATGCTSLKIIPSAFKLASLRELSFSECLRLVRFPEIVCEIENLKYLNLWQTAIEELPFSIGNLRGLESLNLMECARLDKLPSSIFTLPRLQEIQADSCRRFDISVECEDHGQLRLLTASPNIVHLYLSSCNLTTEHLVICLSGFANVVYLDLSYNSFAVLPACIKECIHLKTLLLSNCKQLQDILVIPPKLKDIDALNCTSLTSQSSSVLLSQAIHGTGQKTVILPGSRIPEWFDHCSSERSITFWGRERFPRICVCVSFGMLENPLHHFQVALFCIVINGHKRILSKHCYDWSMETDHLWLFDLTALISHEDLRGRFVKSDWNHVEIEMEWNSCIQGDHGPTRMAIVKWYGIHIYRQESKMEDISFTKPRNLQENNTSKRVGSEILDLEKRQKRS 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00334 926 Gene3D Ribonuclease Inhibitor 397 561 IPR032675 -
Pumo11g00334 926 MobiDBLite consensus disorder prediction 899 926 - -
Pumo11g00334 926 SUPERFAMILY L domain-like 349 734 - -
Pumo11g00334 926 Gene3D Ribonuclease Inhibitor 562 784 IPR032675 -
Pumo11g00334 926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 641 IPR044974 GO:0006952
Pumo11g00334 926 Gene3D - 200 293 IPR042197 -
Pumo11g00334 926 Pfam NB-ARC domain 49 252 IPR002182 GO:0043531
Pumo11g00334 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 303 IPR027417 -
Pumo11g00334 926 MobiDBLite consensus disorder prediction 899 913 - -
Pumo11g00334 926 Gene3D - 29 193 IPR027417 -
Pumo11g00334 926 PRINTS Disease resistance protein signature 233 247 - -
Pumo11g00334 926 PRINTS Disease resistance protein signature 141 155 - -
Pumo11g00334 926 PRINTS Disease resistance protein signature 591 607 - -
Pumo11g00334 926 PRINTS Disease resistance protein signature 66 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00334 Pumo-Chr11 12106227 12110589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00334 44 724 WRKY Transcription Factor Family AT5G45050 29.790 9.77e-59 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00334 - - gmx:100796191 1586.62