Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00329 ATGGTGAGACATTGTATGTTGTATCCGGTGGATGATGGCGTCGTCACATTGACTGCTGCAAGAGGCACAATGGGCTACATGGCTCCAGAATTGTTCTATAAGAATATTGGATCAGTCTCCTTCAAGGCTGATGTTTACAACTTTGGAATGTTGTTGATGGAAATGGCACATACACAGAAGAATGTGAATTCAACCCAAGTTTTTCCCACTTGGATTTATAATCAATTTAATAAAGGAGAAGACATAAAATGTGAAACGTCCTTCAATGAAAAAAGTAGTAGAGATGCTAGAAGGGGAACTTGA 303 0.3894 MVRHCMLYPVDDGVVTLTAARGTMGYMAPELFYKNIGSVSFKADVYNFGMLLMEMAHTQKNVNSTQVFPTWIYNQFNKGEDIKCETSFNEKSSRDARRGT 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00329 100 Pfam Protein tyrosine and serine/threonine kinase 18 88 IPR001245 GO:0004672|GO:0006468
Pumo11g00329 100 SUPERFAMILY Protein kinase-like (PK-like) 12 67 IPR011009 -
Pumo11g00329 100 Gene3D Transferase(Phosphotransferase) domain 1 7 96 - -
Pumo11g00329 100 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 86 IPR045874 GO:0004672
Pumo11g00329 100 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00329 Pumo-Chr11 11959127 11959548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00329 12 80 Receptor kinase-like Gene Family AT5G38280 42.308 1.03e-16 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo11g00329 PK_Tyr_Ser-Thr 5.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00329 - - qsu:112010735 127.487