Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00310 ATGCCGGATGTTCAAGCCCTTGTTAATGATTTTGTGAATCTGCTCAAGAAACGTAAAATTGAAGGGTCTCAGGCCACAGCAAAGCAGACAGCAGAGTTGCTCCGGTCAGTGATTTCACATCAGCGGGTGCCACACACAAACCAGGCCACAGTTCTGATTAATACAGTAAGGGCTGTGGGGGAGCAGATTATTGATGCTAATCCTATTGAGTTAGCTGTGGGAAATATCGTGAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCCTTTGCAACGGATGCTATGGCTGGTTTGGGGATGTATGCTGGAAGTGATGATGAGGATGATGGGGAGCGAGATGATTATCCTGCTTTATCTGCTGCCGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCGTCATTGCAAACTCTTCTTGAGGATGTGACCGATCCTGCTACTGTTCCACCAACACCTTCCTCGGGGGGTGACTCTGAAGGGAAAAGTAGATCTGTTGAAAAGGGTTTAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTAAATGAACTTATTCAAGACATAACCTCTTGCCATGAACAAATAGCAGAGCAGGCAGTGGAGCATATTCATCAAAATGAGGTAATATTAACACTAGGCAGTTCAAACACAGTGTTGGAATTTCTCTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTTGTTGTTGCTGAAGGTGCCCCAAGATATCAGGGACAACTCCTTGCAAAAGAACTGGCTGCTAGAGGCTTACAGACCACAGTAATTGCTGATTCTGCGACTTTTGCTATGATTTCCCGAGTGAATATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTAATTGTCCCAATAGGGTTACATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCACAAGTTGTGCCCATTGTATCCACACAATCCTCAAGTCCTACTGAATGAGCTGAGATCCCCATCAGAGCTACTTGACTTTGGGGAATTCTCAGATTTGATGGATTCAGCAACTGGTGCTGGTTCTCTTCATGTTGTTAATCCAGCATTTGATTATGTGCCACCAAACCTCGTTAATCTCTTCATTACTGACACTGGAGGGCATAACCCGTCATATATGTACCGGCTCATAGCTGATTATTACTCAGCTGATGATTTGGTAGTGAAACAAAGACCTACTACAGGGAATTGA 1248 0.4487 MPDVQALVNDFVNLLKKRKIEGSQATAKQTAELLRSVISHQRVPHTNQATVLINTVRAVGEQIIDANPIELAVGNIVRRVLHIIREEDLSFATDAMAGLGMYAGSDDEDDGERDDYPALSAAAVAAAARSTLRPPSLQTLLEDVTDPATVPPTPSSGGDSEGKSRSVEKGLRGRKLKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSNTVLEFLCAAKEKKRSFKVVVAEGAPRYQGQLLAKELAARGLQTTVIADSATFAMISRVNMVIVGAHAVMANGGVIVPIGLHMVALAAQRHAVPFVVLAGSHKLCPLYPHNPQVLLNELRSPSELLDFGEFSDLMDSATGAGSLHVVNPAFDYVPPNLVNLFITDTGGHNPSYMYRLIADYYSADDLVVKQRPTTGN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00310 415 MobiDBLite consensus disorder prediction 141 171 - -
Pumo11g00310 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 404 IPR037171 -
Pumo11g00310 415 FunFam translation initiation factor eIF-2B subunit beta 194 400 - -
Pumo11g00310 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Pumo11g00310 415 Gene3D - 194 399 IPR042529 -
Pumo11g00310 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00310 Pumo-Chr11 11345708 11352368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00310 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 78.973 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00310 K03754 - gmx:100807877 732.25