Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo11g00302 | ATGTCCATCGACACCTCCTTCGCGGACCACAAGCTCTGCGGTTTCCTCTGTGCGGTTCTCACACTCCCCCGCCGCGACGACGCCGTTTCCTTCGCGGAGCGCTGCGAGGTCTTCGGCGACGGGGGCGAGGTCGGGCTCCGGACCCAGAACGGCGTCGTTTTGGGCCCCGTGGTGGATTCGTCGTCGCAATGCGGTGGCGGTGGCGGCGGCGGCACCAAAACCAAGAGGACGAACAGGATTGGGATGGTGAACGGGAGCATGAGCGTGGTTCACCAGCTCCACGCTATGGTCACCCGCAAGTGCACCAAGATCGACGCTCGCGTGGTGTGCGCTGAGGCGCTTCCTAGGGTTGTGGTGCTCGTTGACGTGTATGTCCCCGTTCAGGTGTGGAGTGGCTGGCAGTTCCCGCGGTCGGGACCCGTCGCCGGCGCCGTTTTTCGCCATTTGAGCTGTGATTGGGATGAGAGAAGTTCAATGCTTTCATATCCAGACTATTGTAGTAAGAGTCATGGAGCAAATGAGAGCATTTGGAACCTTTCTGATTGTCATGTACTTGGTTGCAAGCTCCATTCCCGTGTGAGAAATTCTTCAAGGAAAAGGCTATTTGAACTTCATGAAATTTTTAAGACACTACCTGGTGTAGGAAAATGGCAGACGTTTAATAGTTCGAAGATAATACCTATGGATAACACTTGCAGATCAGGCATTTGGGAGATATCTGATGATATTTTAACTAAAATTTTAGCTTCCCTGGGCCCAATGGACCTCGCTAGGGTTTCAGCAACATGCCATCATCTAAGATCCTTGGCTGCCTCAGTAATGCCTTGTACAAAGTTAAATCTGTTTCCTCATCAGCGGGTAGCAGTTGAGTGGATGTTGCATCGTGAGCGAAATGCTGAGCTTTTGCCACATCCTTTATATGTAGCTCTCTCAACTGATGATGGCTTTAGTTTCCATGTAAATACTGTATCTGGTGAAATTGTCACTGGGGAAGCTCTCACCATCAAGGATTTTCGTGGAGGAATGTTTTGTGATGAGCCTGGCTTGGGTAAGACTGTAACAGCTCTCTCTCTTATTATGAAGACGCGAGGTACATTGGCAGACCCGCCAGATGGGGCACACGTAATCTGGTGTCAACATAATGGTAATCAGAAATGTGGTTATTATGAGATCAGTGGTAATAACATCACTGGTTGTACTACCTTGGGTAAGAGGGATGTGTACCAAGATACCAGTAGAACTAATGATAACCATGATTACTCCTCCAAAAGAGCCAGATTGACAGATCCTGATCAGCAAGTCACTAAACTTCGTGGTTCATGTTCCAGGGAAGGAAACAAATCACCAGTAGATGCATGCTTTGAGGAATCTATGCATTCAAATCGGTTGACTAGGAGTTTGAGTCGCATAAAGAAAAATTTACGTTTCACATATGAAGAGGAAGCTATGATTTTCAAGGAAAGAGAAATTGGTGAAGGATTAATTAAAGCAAAGCATGCATCAGATGTTACATCTCATGTATCTCAAAACAAGGTGTCTGGGAAGCCTAAAGGTGATTGTTTTGAGTATAGTGAAACGTGGATTCAGTGTGATGCTTGTCAGAAGTGGCGAAAGCTTGCAGACAATAGTATGGCTAATTCTAGTGCAGCATGGTTTTGTAGTATGAACACTGACCCTTTGTATCAAAGTTGTAGTGTCCCTGAACAATATTTTCATAATACCTGTAAGATAACATACTTGCCAGGGTTTCACTTGAAAGGAACTTGTGGTGGTGAGAAACAAAATGTTTCTTTTTTCACTAGCGTGCTTAAGGAGCACCACTCATTGATAAATTCTCAGACAAAGAAGGCCCTGACGTGGTTGGCTAAAATTTCAACAGACAAACTTGCAGGAATGGAAACAATTGGCATAAGGGGTCCTATTTTAAACATTTGTACTTCATCTAATGGACATCTCAATGCATTCCACAAAATATATCAAGCATTTGGCCTCTTAAAGAGAGTAGAGAAAGGTGTGTGCAAGTGGTACTACCCTCAACATCTTAACAATTTGACTTTTGATGTGGTGGCCCTTGGTATGGCTCTCCGTGAGCCATTAGATTTTGTTAGGTTATACTTGTCAAGAGCTACCCTGGTAGTTGTTCCAGCAAACTTGGTTGATCATTGGAAAACACAAATAGAAAAGCATGTGAGGCCCGGTCAATTGCGGGTGTATGTTTGGACTGATCATCGGAAGCCATCTGTTCATTGTCTTGCATGGGATTATGATGTTGTCATAACTACTTTCAGTCGCTTGAGTGCAGAGTGGCGCCCACGTAAGAGGAGTGTTTTGATGCAAGTGCATTGGTTTAGGATAATTTTAGATGAAGGGCACACTCTTGGGTCAAGCCTGAACTTAACGAACAAGTTGCAAATGGCTATTTCATTGATAGCTTCAAATCGATGGATACTAACAGGAACTCCAACACCTAACACTCCTAACAGCCAACTTCCACATCTACAACCATTGCTAAGGTTCCTTCATGAAGAATCTTATGGACTGAATCAAAAGTCATGGGAAGCTGGCGTGCTTAGGCCATTTGAAGCAGAGATGGAGGAAGGAAGGTGTCGTCTGTTACATTTACTTCACAAATGCATGATTAGTGCTAGAAAGATAGATTTACAAAGCATTCCACCATGCATCAAGAAAGTTGTTTATCTAGATTTTAATGAGGAGCATGCTAGAAGTTACAATGAATTGGTAATCACTGTACGACGTAATATATTGATGGCTGATTGGAATGATCCTTCACATGTTGAGAGTCTACTAAATCCAAAACAGTGGAAATTTCGTAGTGCAACTTTAAAAAATGTGAGGCTTTCATGCTGTGTTGCTGGACATATTAAAGTTACACATGCTGGAGAAGATATTCAAGAAACAATGGATATGTTAGTAGAAAGTGGTCTGGACCCTACTTCAGGAGAGTATACCTCCATAAGATATAATCTCTTGTTTGGTGGTCACTGTGTCAGGTGCAAGGAATGGTGCCGCCTTCCGCTCATTACACCATGTCGGCATCTGTTGTGCCTTGATTGTGTTTCTATAGACAATACAAAGTGTACTTATCCTGGCTGCAGTAAATTGTATGAGATGCAGAGTAGAGAGCCCCGACCTGAAAATCCTAAACCAAAGTGGCCTGTACCCAAAGATCTTATTGAGCTACAACCTTCATATAAGCAGGATAATTGGGATCCTGATTGGCAATCTACATCTAGTAGTAAAGTCTCCTATCTCGTCCAGAGGTTGAAAGCTTTGCGAGGAACCAATGAAGAGACAAACTTCAATACAGAAAATAGCAGTGATGAGATGCATATTGAGAATAGTTTCTATCTGCATAGAAGAAATGACAAATCATCAATTCAGAGCAGCACTAAGACCAATTTGAACCCTGAGAAAGTTCTGATATTTTCTCAATTTCTTGAGCATATACATGTCATTGAACAGCAGTTGACTATTGCTGGTATCAAATATACTGGAATGTATAGCCCAATGCATTCCAGCAACAAGAAGAAGTCATTAGCCATGTTCCAGCATGATTCAAGTTGTATGGCACTTCTGATGGATGGAAGTGCTGCATTGGGTCTTGACTTGAGTTTTGTTACGCATGTATTTCTAATGGAGCCAATTTGGGACAGAAGTATGGAGGAGCAAGTAATTAGTCGTGCTCATCGTATGGGTGCTTCTCGTCCTATTCATGTGGAAACATTAGCAATGCGTGGTACAATTGAAGAGCAAATGCTAGCCTTTTTACAGGATGCTGATAACTTTAGAAGATCACCGATTAAGGATGTTACTGAATCTGACGATGATAGTGGGGGACGAGGATATAAATCATTGCATGATTTTGCTGAAAGTAGTTATCTACTGAAACTTAGATCTGTGTATACTAATTCGGAAAGTCCCGAAGGTGTTTTGATTGATCAACATCAAGCAAGTACTGACTAA | 3984 | 0.4307 | MSIDTSFADHKLCGFLCAVLTLPRRDDAVSFAERCEVFGDGGEVGLRTQNGVVLGPVVDSSSQCGGGGGGGTKTKRTNRIGMVNGSMSVVHQLHAMVTRKCTKIDARVVCAEALPRVVVLVDVYVPVQVWSGWQFPRSGPVAGAVFRHLSCDWDERSSMLSYPDYCSKSHGANESIWNLSDCHVLGCKLHSRVRNSSRKRLFELHEIFKTLPGVGKWQTFNSSKIIPMDNTCRSGIWEISDDILTKILASLGPMDLARVSATCHHLRSLAASVMPCTKLNLFPHQRVAVEWMLHRERNAELLPHPLYVALSTDDGFSFHVNTVSGEIVTGEALTIKDFRGGMFCDEPGLGKTVTALSLIMKTRGTLADPPDGAHVIWCQHNGNQKCGYYEISGNNITGCTTLGKRDVYQDTSRTNDNHDYSSKRARLTDPDQQVTKLRGSCSREGNKSPVDACFEESMHSNRLTRSLSRIKKNLRFTYEEEAMIFKEREIGEGLIKAKHASDVTSHVSQNKVSGKPKGDCFEYSETWIQCDACQKWRKLADNSMANSSAAWFCSMNTDPLYQSCSVPEQYFHNTCKITYLPGFHLKGTCGGEKQNVSFFTSVLKEHHSLINSQTKKALTWLAKISTDKLAGMETIGIRGPILNICTSSNGHLNAFHKIYQAFGLLKRVEKGVCKWYYPQHLNNLTFDVVALGMALREPLDFVRLYLSRATLVVVPANLVDHWKTQIEKHVRPGQLRVYVWTDHRKPSVHCLAWDYDVVITTFSRLSAEWRPRKRSVLMQVHWFRIILDEGHTLGSSLNLTNKLQMAISLIASNRWILTGTPTPNTPNSQLPHLQPLLRFLHEESYGLNQKSWEAGVLRPFEAEMEEGRCRLLHLLHKCMISARKIDLQSIPPCIKKVVYLDFNEEHARSYNELVITVRRNILMADWNDPSHVESLLNPKQWKFRSATLKNVRLSCCVAGHIKVTHAGEDIQETMDMLVESGLDPTSGEYTSIRYNLLFGGHCVRCKEWCRLPLITPCRHLLCLDCVSIDNTKCTYPGCSKLYEMQSREPRPENPKPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVSYLVQRLKALRGTNEETNFNTENSSDEMHIENSFYLHRRNDKSSIQSSTKTNLNPEKVLIFSQFLEHIHVIEQQLTIAGIKYTGMYSPMHSSNKKKSLAMFQHDSSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIHVETLAMRGTIEEQMLAFLQDADNFRRSPIKDVTESDDDSGGRGYKSLHDFAESSYLLKLRSVYTNSESPEGVLIDQHQASTD | 1327 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo11g00302 | 1327 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1132 | 1285 | IPR001650 | - | |
| Pumo11g00302 | 1327 | Pfam | CW-type Zinc Finger | 526 | 569 | IPR011124 | GO:0008270 | |
| Pumo11g00302 | 1327 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 674 | 839 | IPR014001 | - | |
| Pumo11g00302 | 1327 | ProSitePatterns | Zinc finger RING-type signature. | 1017 | 1026 | IPR017907 | - | |
| Pumo11g00302 | 1327 | Pfam | Helicase conserved C-terminal domain | 1138 | 1239 | IPR001650 | - | |
| Pumo11g00302 | 1327 | Gene3D | - | 522 | 574 | - | - | |
| Pumo11g00302 | 1327 | SMART | fbox_2 | 239 | 279 | IPR001810 | GO:0005515 | |
| Pumo11g00302 | 1327 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 706 | 864 | IPR027417 | - | |
| Pumo11g00302 | 1327 | CDD | DEXDc_SHPRH-like | 703 | 880 | - | - | |
| Pumo11g00302 | 1327 | Pfam | F-box domain | 239 | 273 | IPR001810 | GO:0005515 |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo11g00302 | - | - | gmx:100803102 | 2442.15 |
Showing 1 to 1 of 1 entries