Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00296 ATGGAAGCCGTTGTTGGAATAGTCTTACAAAAGTTGAGCTCTTTTGCGCACGAAAAGTTTGAAATCATCTGGAATCTCAAAGATGATATACAACGAATGAAGAGCATGGTGACTGCAATAAAAGCTGTACTCCAGGATGCAGAGGCAAAGGCTAACAACCTTCAAATTAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGACTTGCTAGATGATCTCTCTACTGAAGCTTTGAAAAGAAAAATGAGGGGTGGTAACAGAATCTTGAGAGAGGTAGATATTTTCTTCTCCCAATCAAACCAAATTGTCTATGGTTTTAAATTGGGTCAAGAAATGAAAGCAATCCGGAAGAGGCTAGATGCTATTGCTGAAAACAAGATTAAATTGCAATTGACTGACCGCCCTATGGAGACTCCAATTGCATACAGGGAGCGGAGACAAACTTACTCTTTTGTGAGTAAAGATGAAGTCATTGGGAGAGAGGTGGAAAAAGAACTTCTTAAAAGTTATCTACTACACACCAAAGTGAGTGTGACAGACAATGTTTCTGTAGTTCCAATTGTTGGGATTGGAGGTCTAGGTAAGACTACCCTTGCTCAACTTGTTTATAATGATAATGCCGTCCATCGCTATTTTGAGCAAAAAATGTGGGTGTGTGTCTCGGATGAATTTGACATAAAGAAAATAGCTCAGAAGATGATTGGGGATGACAAGAATAGTGAGATTGAGCAGGTACAACAAGATCTCAGAAACAAAATTCAGGGGAAGAAGTATCTACTTGTGCTGGATGACGTGTGGAATGAAGATCGTGAGCTGTGGCTTAAACTGAAGAGCTTAGTCAAGGAAGGAGGTAAAGGCAGCATCATAATTATAACAACACGTAGTAGGACCGTGGCAAAAATAATGGGCACACATCCACCCCTTTTCTTAAAAGGTCTGGATTTAGAAAGATCTTGGAAGCTATTCTCTCGAGTGGCTTTTGATGGGGGGAAAGAACCAAATGATAGGGAGTTGTTAGCCATAGGAAGGGATATTGTTAAAAAATGTGCTGGGGCTCCCCTTGCCATCAGAACTATTGGCAGCCTCTTGTATTCTCGAAACTTGGGCCGGAGTGATTGGCTATATTTTAAGGAAGTTGAGTTTTCAAAGATAGATCAACAGAAGGACAAAATCTTTGCAATCCTTAAACTGAGTTATGACCATCTTCCTTCATTTTTGAAAAACTGTTTTGCTTATTGCTCATTGTTTCCAAAAGGTTTTGAGTTTGACAAGAAAACCCTCATTCAGTTATGGGTAGCTGAGGGATTCATTCAACCATCAAATGACGATAGATGTGAAGAAGATGTTGGTCATGAGTACTTCATGAATTTGCGGTCAGTGTCACTTTTCCAAGATGTCACTACAAATGATTATGGAGACGTAAGTACTTGTAAAATGCATGACCTGATACATGATCTGGCACAGTTAGTGGTTGGGAAAGAATATGCCACTGTTGAAGGAAAAAAAGAGAACATTGAAAGCAGAACACGTTATTTGTCATCTCGTACTCCGTTACATTTTGCAGAGACATCATATTCCTACAAGTTAAGGACATTTCTTGTGCATGGACAGGGACAACAACTTTATAGAAGCAGAAATATGGGTTTGTTACATTGTCATTTTCCTTTTCTTTTATACCTAAAGTGCTTACGAGTATTAACACTTTGTGGGTCGGATTTTGTAACAATTCCAAATAGTATTAAAAAGTTGAAGCATTTGAGATATCTTGATCTTTCAAGAAATCATTTTCTGGTATATCTTCCACCAGACGTTACTAGCCTACATAAGTTGCAAAGTCTAAAACTTTCTCAATGTTTTGAACTCAAAGAATTACCCTCAAATATCAACAAAAGTCTTAGGCACCTCGAATTGAATGATTGTGAGAGATTGACATGTATGCCATATGGGTTGGGACAGTTGACCAATCTTCAAACACTGACACATTTTTTATTGGACTCGGAAAGTATAAGTTGTGATATAAGTGAATTGAGTGGGCTAAACAGCCTTAGAGGGAAATTGGAAATTAAATGGTTGGATTCCCTGCGAGGGAATGCTGCAGATGTTGAGTCTGCAAAGGTACTTCTTGAGAAGCAACATCTTCAGGAATTGGAATTACGGTGGCGGCATGATGTGGATGATTTATTGAAGGATGAGAAAATTTTACAAGGCCTGCAGCCACACCACTCAATTAAAAAACTTGTAATAGATGGATATTGTGGCGAAAGTTTACCAGACTGGGTGGGGAATCTCTTATCACTCTTGAGTCTTGAAATCAGCAATTGCAAAGGTTTGAAATCACTACCTGAAGGAATTCCTAACCTTGTATCTTTACAGCGACTCTGCATATATAATTGCCCACTGTTAGAAAGAAGATGTGCAAGAACAATTGGTGAAGACTGGCAAAAAATCACTCACATCCCAAAAGTTTTTGTCTCTCCCTTACCTTCTTCTCTCAGGTATATTAATTGA 2520 0.3869 MEAVVGIVLQKLSSFAHEKFEIIWNLKDDIQRMKSMVTAIKAVLQDAEAKANNLQISNWLEELKDVLYDADDLLDDLSTEALKRKMRGGNRILREVDIFFSQSNQIVYGFKLGQEMKAIRKRLDAIAENKIKLQLTDRPMETPIAYRERRQTYSFVSKDEVIGREVEKELLKSYLLHTKVSVTDNVSVVPIVGIGGLGKTTLAQLVYNDNAVHRYFEQKMWVCVSDEFDIKKIAQKMIGDDKNSEIEQVQQDLRNKIQGKKYLLVLDDVWNEDRELWLKLKSLVKEGGKGSIIIITTRSRTVAKIMGTHPPLFLKGLDLERSWKLFSRVAFDGGKEPNDRELLAIGRDIVKKCAGAPLAIRTIGSLLYSRNLGRSDWLYFKEVEFSKIDQQKDKIFAILKLSYDHLPSFLKNCFAYCSLFPKGFEFDKKTLIQLWVAEGFIQPSNDDRCEEDVGHEYFMNLRSVSLFQDVTTNDYGDVSTCKMHDLIHDLAQLVVGKEYATVEGKKENIESRTRYLSSRTPLHFAETSYSYKLRTFLVHGQGQQLYRSRNMGLLHCHFPFLLYLKCLRVLTLCGSDFVTIPNSIKKLKHLRYLDLSRNHFLVYLPPDVTSLHKLQSLKLSQCFELKELPSNINKSLRHLELNDCERLTCMPYGLGQLTNLQTLTHFLLDSESISCDISELSGLNSLRGKLEIKWLDSLRGNAADVESAKVLLEKQHLQELELRWRHDVDDLLKDEKILQGLQPHHSIKKLVIDGYCGESLPDWVGNLLSLLSLEISNCKGLKSLPEGIPNLVSLQRLCIYNCPLLERRCARTIGEDWQKITHIPKVFVSPLPSSLRYIN 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00296 839 Gene3D - 317 402 IPR042197 -
Pumo11g00296 839 Pfam Rx N-terminal domain 4 88 IPR041118 -
Pumo11g00296 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 417 IPR027417 -
Pumo11g00296 839 Gene3D Ribonuclease Inhibitor 545 839 IPR032675 -
Pumo11g00296 839 Gene3D - 4 132 - -
Pumo11g00296 839 Gene3D - 403 493 IPR036388 -
Pumo11g00296 839 PRINTS Disease resistance protein signature 353 367 - -
Pumo11g00296 839 PRINTS Disease resistance protein signature 188 203 - -
Pumo11g00296 839 PRINTS Disease resistance protein signature 256 270 - -
Pumo11g00296 839 PRINTS Disease resistance protein signature 585 601 - -
Pumo11g00296 839 Coils Coil 60 80 - -
Pumo11g00296 839 Gene3D - 146 309 IPR027417 -
Pumo11g00296 839 SUPERFAMILY L domain-like 482 804 - -
Pumo11g00296 839 PANTHER DISEASE RESISTANCE PROTEIN RP 51 799 IPR044974 GO:0006952
Pumo11g00296 839 FunFam Probable disease resistance protein At1g63360 403 493 - -
Pumo11g00296 839 FunFam Probable disease resistance protein At1g61300 145 311 - -
Pumo11g00296 839 Coils Coil 695 715 - -
Pumo11g00296 839 Coils Coil 30 50 - -
Pumo11g00296 839 Pfam NB-ARC domain 183 404 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00296 Pumo-Chr11 11050392 11053143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00296 185 839 WRKY Transcription Factor Family AT5G45050 23.034 3.59e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00296 - - gmx:100781872 1280.39