Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00295 ATGCTTGTGCAAAACTTCATCTGGCAAAGGATGGAAGCAATTGCTGGGATAGTCTTACAAAACTTGAACTCTTTTGCTCAAGAGGAGTTTGGAATCATTTGGAATCTCAAAGATGATGTACAACGAATGAAGTGCACAGTGACTGCAATAAAAGCTGTACTCCAGGATGCAGAGGCAAAGACCAACAACCTTCAAATTAGTAATTGGTTGGAGGAGTTGAAAGATGTACTTTATGATACAGATGACTTGCTAGAGGGTATCTCTATTAAAGCTTTGGAAAGAAAAGCGATGGGTGGTAACAGCATCTTAAGAGAGGCAAAGATTTTCTTCTTCCACTCAAACCAAATTGTCTATGGTTTTAAATTGGGACATGAAATGAAAGAAATTCGGAAGAGGCTAGAGGATATTGCTAAAAACAAGACTACATTGCAATTGACTGACTGCCCTAGGGAGACTCCAATGGCATATAGGGAGCAGAGACAAACTTACTCTTTTGTGAGTAAAGATGAAGTCATTGGGAGAGAGGAGGAAAAGAAACTTCTTAAAAGTTATTTACTACACACCAAAGTGAGTGTGACAGACAATGTTTCTGTAGTTCCCATTGTTGGGATTGGAGGTCTAGGTAAGACTACCCTTGCTCAACTTGTTTATAATGATAACGCCGTCCATCGATATTTTGAGCAAAAAATGTGGGTGTGTGTCTCAGATGAATTTGACATAAAGAAAATAGCTCAAAAGATGATTGGGGATGACAAGAATAGTGAGGTTGAGCAAGTACAACAAGATCTCATAAACAAAATTCAGGGGAAGAAGTATCTACTTGTGCTGGATGACGTGTGGAATGAGGATCGTGAGCTGTGGCTTAAACTGAAGAGCTTAGTCAAGGAAGGAGGTAAAGGGAGCATCATAATTGTAACAACACGTAGTAGGACCGTGGCAAAAATAATGGGCACACATCCACCCCTTTTCTTAAAAGGTCTGGATTTAGAAAGATCTTGGAAGCTATTCTCTCAAGTGGCTTTTGATGGGGGGAAAGAATCAAATGATAGGGAGTTGTTAGCCATAGGAAGGGATATTGTTAAAAAGTGTGCCGGGGTTCCCCTTGCCATAAGAACTATTGGCAGCCTCTTGTATTCTCGAAACTTGGGCCGGAGTGATTGGCTATATTTTAAGGAAGTTGAGTTTTCAAAGATAGATCAACAGAAGGACAAAATCTTTGCAATCCTTAAACTGAGTTATGATCATCTTCCTTCATTTTTGAAGAACTGTTTTGCTTATTGTTCATTGTTTCCAAAAGGTTTTGAGTTTGACAAGAAAACACTCATTCAGTTATGGTTAGCTGAGGGGTTCATTCAACCATCAAACGACAATAGATGTGAAGAAGACGTTGGTCATGAGTACTTCATGAATTTGCTGTCAATGTCACTTTTCCAAAATGTGACTATGGATGATTGTGGTGACATAATTACTTGTAAAATGCATGACCTGATACATGATCTAGCACGACTAGTGGTTGGGAAAGAATATGCCATTGTTGAAGGAGAAAAAGGAAACATTGGAAACAGAACACGGTATTTGTCATCTCATACTTGGTTACATTTTGCAGAGACATCTTCATCTTCCTACAAGTTCAGGACAGTTATTGTGCTTGGACTGCCACTTTACGGAAGCAAAAATTTGGAAGCATTACATCTTCGTTTTGTTTTAAGCCTGAAGTGCTTACGGGTGTTAACACTTTGTGGGTTGGAGATTGTAACCATTCCAAAGAGTATTGGAGAGTTGAAGCATTTGAGATATCTTGATCTTTCAAGGAATCATTTTCTTGTAAATCTTCCACCAGATGTTACTAGCCTACATAATTTGCAAACTCTGAAACTTTCTCAATGTTTAAAACTCAAAGAATTACCATCAGATATCAACAAAGGTCTTAGGCATCTCGAATTGAATGATTGTGAGGAATTGACGTGTATGCCGTGTGGGTTGGGACAATTGACCAATCTTCAAACATTGACACATTTTTTGTTGGACCCTTTAAGTAAAAACGGTGATATAAGTGAACTGAGTGGGCTAAACAGCCTTAGAGGGAAATTGGAAATTAAATGGTTGGATTCCCTGCAAGAGAATGCTGCGGTGGTTGAGTCTGCAAAGGTACTTCTTGAGAAGCAACATCTTCAAGAATTGGATTTACGGTGGAGGCATGGTGAGAAGGTTAGACAATCGCCACTATGGTGGGAGGATCCTATTGCAGAAAGACTTGTGAACGAAATAGAAAACAGCTGGTTGGAAGATGACATGAAATTACAAGGCCTGCTTCCACATCACTCAATTGAAAATCTAGATAAAGGAAACAGCTTGTCGAATGAAGAGAAGATATTGGCTTTTCATAAGAAAAAAAAGAATGATGAGAAGATATTACAAGGCCTGCAGCCACATTACTCAATTAAAAGACTTGTAATAGATGGATATTGTGGCGAAAGTTTACCAGACTGGATAGGGAATCTCTCATCACTCTTGAGTCTTGAAATCAGCAATTGCATTGCTTTGAAATCACTACCTGAAGGAATTCGTAACCTAAAATCTTTACAGGAACTCTGCATATATAACTGCTTACTGTTAGAAAGAAGATATGCAAGAACAAATGGTAAAGACTGGCCCAAAATAGCTCATATCCCAAAAGTTATGGTCTCTCCGTTTACACCATCTGCTCTCAAGTATATTAATTGA 2724 0.3869 MLVQNFIWQRMEAIAGIVLQNLNSFAQEEFGIIWNLKDDVQRMKCTVTAIKAVLQDAEAKTNNLQISNWLEELKDVLYDTDDLLEGISIKALERKAMGGNSILREAKIFFFHSNQIVYGFKLGHEMKEIRKRLEDIAKNKTTLQLTDCPRETPMAYREQRQTYSFVSKDEVIGREEEKKLLKSYLLHTKVSVTDNVSVVPIVGIGGLGKTTLAQLVYNDNAVHRYFEQKMWVCVSDEFDIKKIAQKMIGDDKNSEVEQVQQDLINKIQGKKYLLVLDDVWNEDRELWLKLKSLVKEGGKGSIIIVTTRSRTVAKIMGTHPPLFLKGLDLERSWKLFSQVAFDGGKESNDRELLAIGRDIVKKCAGVPLAIRTIGSLLYSRNLGRSDWLYFKEVEFSKIDQQKDKIFAILKLSYDHLPSFLKNCFAYCSLFPKGFEFDKKTLIQLWLAEGFIQPSNDNRCEEDVGHEYFMNLLSMSLFQNVTMDDCGDIITCKMHDLIHDLARLVVGKEYAIVEGEKGNIGNRTRYLSSHTWLHFAETSSSSYKFRTVIVLGLPLYGSKNLEALHLRFVLSLKCLRVLTLCGLEIVTIPKSIGELKHLRYLDLSRNHFLVNLPPDVTSLHNLQTLKLSQCLKLKELPSDINKGLRHLELNDCEELTCMPCGLGQLTNLQTLTHFLLDPLSKNGDISELSGLNSLRGKLEIKWLDSLQENAAVVESAKVLLEKQHLQELDLRWRHGEKVRQSPLWWEDPIAERLVNEIENSWLEDDMKLQGLLPHHSIENLDKGNSLSNEEKILAFHKKKKNDEKILQGLQPHYSIKRLVIDGYCGESLPDWIGNLSSLLSLEISNCIALKSLPEGIRNLKSLQELCIYNCLLLERRYARTNGKDWPKIAHIPKVMVSPFTPSALKYIN 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00295 907 FunFam Probable disease resistance protein At1g61300 154 321 - -
Pumo11g00295 907 FunFam Probable disease resistance protein At1g63360 413 503 - -
Pumo11g00295 907 PANTHER DISEASE RESISTANCE PROTEIN RP 51 866 IPR044974 GO:0006952
Pumo11g00295 907 Gene3D Ribonuclease Inhibitor 535 875 IPR032675 -
Pumo11g00295 907 Gene3D - 15 126 - -
Pumo11g00295 907 Gene3D - 155 319 IPR027417 -
Pumo11g00295 907 Coils Coil 702 722 - -
Pumo11g00295 907 Pfam NB-ARC domain 193 414 IPR002182 GO:0043531
Pumo11g00295 907 Gene3D - 413 503 IPR036388 -
Pumo11g00295 907 Gene3D - 327 412 IPR042197 -
Pumo11g00295 907 CDD RX-CC_like 12 138 IPR038005 -
Pumo11g00295 907 Pfam Rx N-terminal domain 16 100 IPR041118 -
Pumo11g00295 907 Coils Coil 126 146 - -
Pumo11g00295 907 PRINTS Disease resistance protein signature 266 280 - -
Pumo11g00295 907 PRINTS Disease resistance protein signature 198 213 - -
Pumo11g00295 907 PRINTS Disease resistance protein signature 363 377 - -
Pumo11g00295 907 PRINTS Disease resistance protein signature 592 608 - -
Pumo11g00295 907 SUPERFAMILY L domain-like 492 871 - -
Pumo11g00295 907 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00295 Pumo-Chr11 11017737 11020483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00295 195 508 WRKY Transcription Factor Family AT5G45050 25.455 6.56e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00295 - - gmx:100781872 1411.36