Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00292 ATGGGTTTGGCTGCAGAGGCTCAGTTTCATGTTCTGGCTGTTGATGATAGCCTCATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCCTTTCATGTTACTGCTGTGGATTCTGGTAGCAAGGCTTTGAAGTTTCTTGGTTTGGTTGAAGATGAGCAGAGAAATGAAGAGCCTCCCTCTATTGCTCTGGAATCCCATCAGGATGTAGAAGTAAACCTGATCATAACTGATTACTGCATGCCAGAAATGACAGGCTATGATCTGCTGAAAAAGATCAAGGAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGAATCAACAGATGCCTAGAAGATGGAGCTGATGAGTTCTTTCTGAAACCAGTTCAACAGTCAGATGTAAACAAGCTGAGGCCCCATTTGTTGAAATCATCAAAGGTTAAGGATGAAGAAGACCAACAACAAATCAACAACTAA 489 0.4172 MGLAAEAQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEDEQRNEEPPSIALESHQDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINRCLEDGADEFFLKPVQQSDVNKLRPHLLKSSKVKDEEDQQQINN 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00292 162 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Pumo11g00292 162 CDD REC_typeA_ARR 11 141 - -
Pumo11g00292 162 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 151 IPR045279 GO:0009736
Pumo11g00292 162 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Pumo11g00292 162 Gene3D - 10 162 - -
Pumo11g00292 162 SMART REC_2 9 142 IPR001789 GO:0000160
Pumo11g00292 162 SUPERFAMILY CheY-like 9 145 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00292 Pumo-Chr11 10957924 10959828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00292 1 155 Response Regulator Gene Family AT3G57040 69.231 5.04e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo11g00292 Response_reg 1.4e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00292 K14492 - gmx:100818762 293.123