Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00274 ATGCCCACTTTAACAAGTTGGAACAATGTTTCTCAATTCTTTGGGCTTCTACAGTTGGAAGCACACAAGTTCATCATCTCAGAGACGGTATCCAACGGATCACAACTTGAGCCGAAGCCGAAACCAATTGATGTAGATCGTATTTTGGGTGATATTTTATATTCTGAGTGTACAAATGCTTCGTTCCACATGGCTATGGAGTGTTTCACGGTCGGTGCCATCATAGATAAATCTGATGTTTACTCATTTGGTACGGTTCTACAAGAAGTTGTGTGTGGATATTTTAAGCTTGCATGGGCACCAAGTGGTAATTATCTATCTACAAAAAGAAGAGAATTTCTCGAGAAGCTAGTTGTGGAGAATATTGATCCGAATATCAAAGGAACTATTGCACCAGAGTGTTGGCAAGTCTTTATAGATATCATCTTAACATGTTTGGAATGGCCATTTGAGCATCCTCAGTTATTGCCCCAAGAAGAGTACAACCTTAGAAACCGATAG 501 0.3972 MPTLTSWNNVSQFFGLLQLEAHKFIISETVSNGSQLEPKPKPIDVDRILGDILYSECTNASFHMAMECFTVGAIIDKSDVYSFGTVLQEVVCGYFKLAWAPSGNYLSTKRREFLEKLVVENIDPNIKGTIAPECWQVFIDIILTCLEWPFEHPQLLPQEEYNLRNR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00274 166 Gene3D Transferase(Phosphotransferase) domain 1 14 154 - -
Pumo11g00274 166 PANTHER OS07G0166700 PROTEIN 60 147 IPR045272 GO:0004714|GO:0006468
Pumo11g00274 166 SUPERFAMILY Protein kinase-like (PK-like) 61 149 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00274 Pumo-Chr11 9926468 9927297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00274 46 147 Receptor kinase-like Gene Family AT4G39110 35.652 4.19e-09 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo11g00274 PK_Tyr_Ser-Thr 3.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00274 - - gmx:100812131 95.1301