Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00273 ATGGACACCAAGCTTCTAACAATCCGCACCCTCGTCTCCGCCCTCAGTTCCGCCTCCGACCAAACCCGCCTCGCCGCCCTCCGCCACCTCCGCAGCACCTCCGCCGAGGACCCCGCCGCCCGCCCCCTCATCTCCGCCGCCGGCGCCGTCCCCCTCCTGGCCGCCGCCCTCTACTCCCCCTCCCACCCTATCCAGGACCACGCCGCCGCCACCCTCCTCAACATCCCCATCTCCGACCGCCGCCCCCTCGCCGCCTCCCCCGCCCTCCCGGCCGCCCTCGCCCACCTCCTCTCCCGCCACGCCACCTCCTCCGCCGCCTCCGCCGTCCAGGCCGCCGCCGCCACCCTCCACAGCCTCCTCGCCGTCGTCGCCGAGTTCCGCACCACAGTCGCCTCAAAACCCGGCATCCTCCGGGCCCTCGTCGGCATAATCAGTCACCCCGACTCGCCGACGAGGTCCATAAAGGACGCCCTCAAGGCGTCCTTCGGAGTCGCCCTCCACCCGCCGAGCCGGATCACGCTGATCCAGCTCGGCGCGGTTCCAGCGCTCTTCGCTCTTGTAGCGAAGGGCAAGGACGGGAAGAGAAGGGTTGGCATAATTGAGGACGCCACCGCGGTGATCGCGCAGGTGGCGGCCTGCGAGGAGGCTGAGGAGGCGTTTCGGAATGTGTCGGGGGTTTCGGTGCTGGCGATGATGTTGGGTTCGGAGAGTGGAAGTTGTAGCTTGAGGACGAAGGAGAATGCGGTTGCGGCGTTGCTGAATTTGGTGAGGTGTGGGAGTGAGAGGGTTTTTGGGGAGGTTAGGGACAAAGTTGGGGGCTTGGATGGGATCTCCTACGTGCAGGAACACGGTAGCCCCAAAGGGAAGAGCAAGGCCGTGGCGTTTTTTAAGCTTTTGCTTGATGGTGGAAGCAGTGGTGAAGTTGTTCAAGATTTGTATCCCGTTGACTCAGAATCAGGTTCAAGTTGCAGTAGGTAA 978 0.6493 MDTKLLTIRTLVSALSSASDQTRLAALRHLRSTSAEDPAARPLISAAGAVPLLAAALYSPSHPIQDHAAATLLNIPISDRRPLAASPALPAALAHLLSRHATSSAASAVQAAAATLHSLLAVVAEFRTTVASKPGILRALVGIISHPDSPTRSIKDALKASFGVALHPPSRITLIQLGAVPALFALVAKGKDGKRRVGIIEDATAVIAQVAACEEAEEAFRNVSGVSVLAMMLGSESGSCSLRTKENAVAALLNLVRCGSERVFGEVRDKVGGLDGISYVQEHGSPKGKSKAVAFFKLLLDGGSSGEVVQDLYPVDSESGSSCSR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00273 325 FunFam ARM repeat superfamily protein 2 304 - -
Pumo11g00273 325 SUPERFAMILY ARM repeat 7 308 IPR016024 -
Pumo11g00273 325 PANTHER U BOX DOMAIN-CONTAINING 8 299 - -
Pumo11g00273 325 SMART arm_5 213 257 IPR000225 GO:0005515
Pumo11g00273 325 SMART arm_5 167 212 IPR000225 GO:0005515
Pumo11g00273 325 SMART arm_5 37 77 IPR000225 GO:0005515
Pumo11g00273 325 Gene3D - 3 297 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00273 8 299 U-box Gene Family AT2G23140 29.592 1.16e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00273 - - gmx:100803111 503.827