Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00266 ATGAAAATCCCGTGTTGTTCGGTTTGCCAAACGCGGTACAACGAGGAGGAGCGGGTTCCGCTTCTGCTCCAATGCGGGCACGGGTTCTGCAGAGAGTGTCTCTCGAGAATGTTCTCGGCGTCTTCGGACGCCACGCTGGCGTGTCCGAGGTGCCGCCACGTGTCCACCGTCGGGAACTCGGTGCAGGCGCTGAGGAAGAACTACGCGGTGCTAGCGCTGCTGCACTCCGCCGCCGCCGTCGTTGGCGGCGGCGGAGGAGGACGGTCGAATTTCGACAGCGACTACACCGACGATGAGGAGGAGGAGGACGGTGGAGGCGGCGGAGAGGAGGAGGAGGAGGACGACGAGAAGCGGCGGCGGAACAGCCGCGAGTCGCAGGCGTCGAGCTCCGGCGGCGGCGGTTGCGAGCCGGTGATCGAGGTCGGGGGCGGCGGCGCGCACCAGGACCTGAAGCTGGTGCGGCGGATTGGGGAGGGGAGGAGGGCGGGGGTGGAGATGTGGATGGCGGTGATCAGTGGTGGCGGAGGCGGCGAGGGAGGGCGGCAGCGGTGCCGGCACAACGTGGCGGTGAAGAAGGTGGCGGTGGCGGAGGGGATGGATTTGGATTGGGTGCAGGGGAAGTTGGAGGATTTGCGTAGGGCTTCGATGTGGTGCAGGAATGTGTGCACTTTCCATGGGACAATGAGGGTGGAAGACAGTTTGTGTCTTGTGATAGATAAGTGCTATGGATCGGTTCAGTCTGAGATGCAGCGCAATGAGGGGAGGCTCACTTTGGAACAAGTTCTAAGATATGGGGCGGACATTGCACGAGGGGTTGTTGAGCTTCATGCTGCAGGTGTTGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTTGATGCAAATGGTCACGCTGTGGTTTCTGATTATGGACTTGCTACAATTCTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCAGAGTGTGACTCTGCGAAGATCCATTCCTGCATGGAATGTATAATGCTCAGCCCACATTATACGGCACCAGAGGCTTGGGAACCTGTGAAAAAATCGTTAAATTTGTTTTGGGATGATGGAATAGGTATATCTTCCGAATCAGATGCCTGGAGTTTTGGTTGTACGTTGGTGGAGATGTGCACGGGTTCCATTCCTTGGGCAGGTTTAAGTGCAGAGGAAATATATCGAGCTGTCGTTAAAGCTAAGAAACTGCCTCCACAGTATGCTAGTGTGGTTGGTGGTGGAATTCCGAGAGAATTGTGGAAGATGATTGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACTTTTAGTGCAATGCTGGCAATATTTCTCCGTCATTTGCAGGAAATACCACGCAGCCCTCCTGCAAGCCCTGATAATGGCTTAGATAAAGATAAGGGCTCTGTGTCAAATGTGATGGAGCCTTCCCCAGTACCTGAATTGGAAGTTCCTCAGGAAAACCCAAACCATCTTCATCGACTTGTGTCTGAAGGAGATACTGCAGGTGTTAGAGATCTTCTTGCAAAGGCTGCATCAGAAAATGGTAGCAACTACCTATCTTCGCTATTGGAAGCTCAAAATGCTGATGGGCAAACGGCGCTTCACTTAGCTTGTAGACGTGGTAGTGCAGAACTTGTTGAGACAATTCTGGAGTATGGAGAAGCAAATGTTGATGTATTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCATTAGCAGCTGGGTCCCCAGAATGTGTTCGTAGCCTTATCAAAAGAAATGCTAATGTGCGGTCACGATTGAGAGATGGTTTTGGCCCATCGACAGCTCACGTTTGTGCCTATCATGGCCAACCAGATTGTATGCGAGAATTACTATTAGCTGGAGCTGATCCCAATGCAGTGGATGATGAAGGTGAATCTGTTCTGCATAGAGCAATTGCCAAGAAGTACACTGACTGTGCTCTTGTGATATTGGAGAATGGAGGCTGCAGATCAATGGCCATCTTGAATTCAAAGAACCTGACACCGCTGCACTTGTGTGTGGCAACATGGAATGTTGCTGTTGTGAAGAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTGACATACCAAGCCCTATTGGCACTGCCTTGTGCATGGCAGCTGCTTCTAAGAAAGACCATGAAAATGAGGGGAGAGAACTGGTGCGGATATTGCTTGCAGCAGGAGCTGATCCATCTGCTCAAGATTCACAGAATGGGAGGACAGCTTTGCATACAGCTGCTATGACTAATGATGTGGACTTGGTTGAGGTTATTTTATCTGCTGGGGTTGATGTGAACATTCGCAATGTGCACAACAGTATACCTCTTCACTTGGCCTTAGCTAGGGGTGCAAAGGCATGTGTTGGACTGCTTCTTGATGCTGGAGCAGATTATAATTTGCAGGATGATGATGGTGACAATGCTTTCCATATAGCAGCAGAGACAGCAAAAATGATTCGTGAAAATCTCGACTGGCTTATTGTTATGCTAATGAATCCTGATGCTGACATTGAAGTCAGAAACCACAGTGGCAAGACACTACGTGACATTTTAGAGGCTCTCCCCCGAGAATGGTTATCTGAAGATCTTATGGAAGCACTCATGAATAGGGGAGTTCATTTGTCTCCTACAATATTTGAATTAGGAGACTGGGTGAAGTTTAAAAGATCTGTTATAACTCCAACACATGGATGGCAAGGTGCTAAACCAAAGAGTGTTGGTTTTGTGCAAAGTGTTCCAGACAGAGATAATCTCATCGTTTCATTTTGTTCTGGAGAGGTTCATGTTCTGGCAAATGAAGTTATAAAAGTCATTCCATTGGACAGGGGACAACATGTACAACTGAAAGAAGATGTAAAAGAGCCTAGATTTGGTTGGCGTGGGCAGTCACGTGACAGCATTGGGACAGTATTATGTGTTGACGATGATGGAATCCTCCGTGTTGGATTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGGAACGTGTAGAGGAATTCAAGGTTGGAGACTGGGTTCGTATTCGTCCAACTCTTACATCTGCAAAGCATGGACTAGGATCTGTGACACCAGGAAGCATTGGCATTGTATATTGTATCCGACCAGACAGTAGTCTGTTAATAGAACTGAGCTATCTTCCAAATCCATGGCATTGTGAACCAGAGGAGGTTGAGCATGTTGCTCCTTTTAGGATTGGGGATCGGGTATGTGTGAAACGATCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAGAATGACGGTCTCTTAATAATAGAGATACCAAATAGACCCATACCATGGCAAGCTGATCCATCAGATATGGAGAAGGTGGAAGATTTCAAGGTTGGAGATTGGGTAAGAGTGAAAGCTTCAGTGTCTTCTCCAAAATATGGATGGGAAGATATTACAAGGAATAGTATTGGGGTAATTCATAGCTTGGAGGAGGATGGTGATATGGGTGTTGCTTTTTGCTTCAGAAGTAAGCCCTTTTCTTGCTCAGTCACTGATGTGGAGAAGGTTCCTCCATTTGAGGTGGGCCAAGAAATTCATGTGATGTCCTCTGTTACTCAGCCACGGCTTGGGTGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGCGAGAATTGACATGGATGGTGCTCTCAATGTGAGGGTCACTGGTAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGGCTTCCAGGATTTGAAGTTGGGGATTGGGTACGGTCAAAACCAAGCCTGGGAACCAGACCAAGCTATGACTGGAATAGTGTTGGGAGAGAAAGCTTAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTGGCTTGCTGTTTTCGCAAAGGGAAGTGGATCACTCATTATACAGATGTTGAAAAGGTTCCTAGCTTTAAAGTTGGGCAGTATGTAAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCTCAAGGGGTTATAACCAGTATTCATGCTGATGGAGAAGTCAGGGTCGCATTTTTTGGTCTGCCAGGACTGTGGAGAGGAGATCCTTCAGACCTCGAGATTGAACAAATGTTTGAAGTGGGAGAGTGGGTGAGGTTGAACGACAATGCAAATAATTGGAAATCAATTGGGCCAGGTAGTGTTGGTGTCGTTCAAGGAATAGGGTATGAAGGCAATGAGTTGGACAGAAGCATTTTTGTTGGATTTTGTGGGGAGCAAGAAAAGTGGGTTGGACCTAGTTCCCATCTTGAAAGATTTGACAAACTCTTTGTTGGACAGAAGGTTAGAGTAAAACAGTATGTAAAGCAACCAAGATTTGGATGGTCAGGGCATACCCATGCTAGTATTGGGACTATACAAGCAATTGATGCTGACGGAAAGCTCCGGATATACACTCCAGCAGGATCCAAAACATGGATGTTGGACCCATCAGAAGTGGTGGTGGTAGAAGAGAAGGAGCTCTGTATTGGAGACTGGGTAAGGGTTAAAGCATCAATTACAACCCCAACCCACCATTGGGGTGAAGTGAGTTATTCAAGCATTGGCGTGGTGCATCGGATGGAAGACGAGGATCTGTGGGTGGCGTTCTGTTTTATGGAGAGGCTATGGCTTTGTAAGGCATGGGAAATGGAACGGGTTAGGCCATTTAAAATGGGGGACAAGGTAAGGATCAGAGATGGACTGGTGACCCCGCGATGGGGATGGGGAATGGAGACACATGCCAGCAAGGGACAGGTTGTAGGGGTAGATGCAAATGGAAAACTGAGAATAATATTCCGGTGGAGGGAAGGGAGGCCCTGGGTAGGAGACCCTGCTGATCTTGCCCTTGATGAGGACTGA 4932 0.483 MKIPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASSDATLACPRCRHVSTVGNSVQALRKNYAVLALLHSAAAVVGGGGGGRSNFDSDYTDDEEEEDGGGGGEEEEEDDEKRRRNSRESQASSSGGGGCEPVIEVGGGGAHQDLKLVRRIGEGRRAGVEMWMAVISGGGGGEGGRQRCRHNVAVKKVAVAEGMDLDWVQGKLEDLRRASMWCRNVCTFHGTMRVEDSLCLVIDKCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLATILKKPSCWKARPECDSAKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDGIGISSESDAWSFGCTLVEMCTGSIPWAGLSAEEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFSAMLAIFLRHLQEIPRSPPASPDNGLDKDKGSVSNVMEPSPVPELEVPQENPNHLHRLVSEGDTAGVRDLLAKAASENGSNYLSSLLEAQNADGQTALHLACRRGSAELVETILEYGEANVDVLDKDGDPPLVFALAAGSPECVRSLIKRNANVRSRLRDGFGPSTAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAIAKKYTDCALVILENGGCRSMAILNSKNLTPLHLCVATWNVAVVKRWVEVATSDEIAEAIDIPSPIGTALCMAAASKKDHENEGRELVRILLAAGADPSAQDSQNGRTALHTAAMTNDVDLVEVILSAGVDVNIRNVHNSIPLHLALARGAKACVGLLLDAGADYNLQDDDGDNAFHIAAETAKMIRENLDWLIVMLMNPDADIEVRNHSGKTLRDILEALPREWLSEDLMEALMNRGVHLSPTIFELGDWVKFKRSVITPTHGWQGAKPKSVGFVQSVPDRDNLIVSFCSGEVHVLANEVIKVIPLDRGQHVQLKEDVKEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGVIHSLEEDGDMGVAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVMSSVTQPRLGWSNESPATVGKIARIDMDGALNVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGTRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPSFKVGQYVRFRTGLVEPRWGWRGAQPESQGVITSIHADGEVRVAFFGLPGLWRGDPSDLEIEQMFEVGEWVRLNDNANNWKSIGPGSVGVVQGIGYEGNELDRSIFVGFCGEQEKWVGPSSHLERFDKLFVGQKVRVKQYVKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSKTWMLDPSEVVVVEEKELCIGDWVRVKASITTPTHHWGEVSYSSIGVVHRMEDEDLWVAFCFMERLWLCKAWEMERVRPFKMGDKVRIRDGLVTPRWGWGMETHASKGQVVGVDANGKLRIIFRWREGRPWVGDPADLALDED 1643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00266 1643 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1642 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Pumo11g00266 1643 SUPERFAMILY RING/U-box 5 58 - -
Pumo11g00266 1643 Pfam RING-type zinc-finger 6 49 IPR027370 -
Pumo11g00266 1643 Pfam Mind bomb SH3 repeat domain 1389 1510 IPR040847 -
Pumo11g00266 1643 Pfam Mind bomb SH3 repeat domain 1519 1638 IPR040847 -
Pumo11g00266 1643 Pfam Mind bomb SH3 repeat domain 886 1004 IPR040847 -
Pumo11g00266 1643 Pfam Mind bomb SH3 repeat domain 1262 1383 IPR040847 -
Pumo11g00266 1643 Pfam Mind bomb SH3 repeat domain 1136 1254 IPR040847 -
Pumo11g00266 1643 Pfam Mind bomb SH3 repeat domain 1066 1130 IPR040847 -
Pumo11g00266 1643 Pfam Ankyrin repeats (3 copies) 510 592 IPR002110 GO:0005515
Pumo11g00266 1643 Pfam Ankyrin repeats (3 copies) 714 809 IPR002110 GO:0005515
Pumo11g00266 1643 ProSiteProfiles Ankyrin repeat profile. 530 554 IPR002110 GO:0005515
Pumo11g00266 1643 SMART ring_2 6 51 IPR001841 -
Pumo11g00266 1643 Pfam Protein kinase domain 185 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00266 1643 SUPERFAMILY Protein kinase-like (PK-like) 146 458 IPR011009 -
Pumo11g00266 1643 Gene3D - 786 870 IPR036770 -
Pumo11g00266 1643 Gene3D - 489 661 IPR036770 -
Pumo11g00266 1643 PRINTS Ankyrin repeat signature 531 546 IPR002110 GO:0005515
Pumo11g00266 1643 PRINTS Ankyrin repeat signature 727 741 IPR002110 GO:0005515
Pumo11g00266 1643 ProSiteProfiles Ankyrin repeat profile. 778 810 IPR002110 GO:0005515
Pumo11g00266 1643 Gene3D Transferase(Phosphotransferase) domain 1 241 472 - -
Pumo11g00266 1643 ProSiteProfiles Ankyrin repeat region circular profile. 530 554 - -
Pumo11g00266 1643 MobiDBLite consensus disorder prediction 452 489 - -
Pumo11g00266 1643 FunFam E3 ubiquitin-protein ligase KEG 599 744 - -
Pumo11g00266 1643 ProSiteProfiles Ankyrin repeat profile. 564 596 IPR002110 GO:0005515
Pumo11g00266 1643 ProSiteProfiles Ankyrin repeat profile. 599 631 IPR002110 GO:0005515
Pumo11g00266 1643 MobiDBLite consensus disorder prediction 86 142 - -
Pumo11g00266 1643 Pfam Ankyrin repeats (many copies) 603 649 IPR002110 GO:0005515
Pumo11g00266 1643 ProSiteProfiles Ankyrin repeat region circular profile. 745 776 - -
Pumo11g00266 1643 CDD RING-HC_KEG-like 3 59 - -
Pumo11g00266 1643 MobiDBLite consensus disorder prediction 94 111 - -
Pumo11g00266 1643 Gene3D - 662 785 IPR036770 -
Pumo11g00266 1643 FunFam E3 ubiquitin-protein ligase KEG 745 877 - -
Pumo11g00266 1643 ProSiteProfiles Ankyrin repeat region circular profile. 778 810 - -
Pumo11g00266 1643 ProSiteProfiles Ankyrin repeat profile. 745 777 IPR002110 GO:0005515
Pumo11g00266 1643 FunFam E3 ubiquitin-protein ligase KEG 481 598 - -
Pumo11g00266 1643 FunFam E3 ubiquitin-protein ligase KEG 242 458 - -
Pumo11g00266 1643 SUPERFAMILY Ankyrin repeat 525 852 IPR036770 -
Pumo11g00266 1643 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Pumo11g00266 1643 ProSiteProfiles Protein kinase domain profile. 150 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00266 1643 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 80 IPR013083 -
Pumo11g00266 1643 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Pumo11g00266 1643 SMART ANK_2a 811 846 IPR002110 GO:0005515
Pumo11g00266 1643 SMART ANK_2a 667 698 IPR002110 GO:0005515
Pumo11g00266 1643 SMART ANK_2a 745 774 IPR002110 GO:0005515
Pumo11g00266 1643 SMART ANK_2a 530 560 IPR002110 GO:0005515
Pumo11g00266 1643 SMART ANK_2a 564 593 IPR002110 GO:0005515
Pumo11g00266 1643 SMART ANK_2a 778 807 IPR002110 GO:0005515
Pumo11g00266 1643 SMART ANK_2a 599 628 IPR002110 GO:0005515
Pumo11g00266 1643 SMART ANK_2a 632 663 IPR002110 GO:0005515
Pumo11g00266 1643 SMART ANK_2a 705 740 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00266 Pumo-Chr11 9773538 9787211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00266 220 477 MAP Kinase Kinase Kinase AT5G66850 25.769 5.43e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pumo11g00266 Pkinase 2.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00266 K16279 - gmx:100782956 3172.1