Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00261 ATGGCATTCAGCGATAAACAAAAGCAAGAAGAAGAAGAAGAACCGCACAGAATGGAAGAAGACGAAGACGACGCTAGCGAAGAAGAAGAAGAAGAAGAAGAAGAAGTATGGGACGATTGGGAAGGAGAAGACGAAGGAGAGCGAGAATCGGAATTCGTGTGTCTCTTCTGTGACTCCCGGTACAGTTCGTGCGGTTCCTTGTTCGACCACTGCGCCTCGCTTCACCACTTCGACTTCCACGCGATTAGAGCAACTCTTAGCTTGGATTTCTATGCCTCCTTCAAGCTCATTAACTTCATCCGCTCTAATGTGGCAGAGAACAGATGTTGGAGTTGTGGATTAACATGCCAGTCCAACCGTGACTTGCAGAATCATTTGCATGAAGTAGTTGACTTTAATGAGATAAAGACTTTGTGGAATGATGATAGGTATCTAATACCTTTCATGCAAGATGATTCACTGTTGTACAGCTTTGGTGAATGTGATGAAGAAGGTGAAGATGAGCAAATTACACAAATCGATGAAGATCTTATAAAGGATTTGATGAACATTGAAGAGAGTATTTGTGCCGACCAAGAAGCTGTGAAAAAAGTGGTAGTTGATGATGGCAAACATGATGCTTCTGTTTCTAATGATCATTTGAATAGGGCTAGTTCTTCAAACAAGGAACTTATTAATGGTAAAAACTCAAGAGGACATGTTTCGTGCAGTGATAAGGATCCAGGAGGGGGACCTTTGATTGCTAATTCTCAAAATCACATTGCAAAGCATATTAAGAAGGTTAATGAAAGTTATTTTGGGTCTTACAGTTCATTCGGTATCCATCGAGAGATGTTAAGTGATAAGGCAAGAATGGATGCTTATGGCCAAGCAATTTTGAAGAATCCCTCTCTACTAAATGGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGAATCCTCAGCCTATTTTCAGCAAAAGCCGGAGCTTCGAGGGTTATTGCAGTTGAGGCTAGTGCCAAGATGGCTGCAGTGGCATCTCAGGTTGCAAAAGATAATGGTCTTTTGTTGAGTAAAAGCCAAAATGGAGTTGATGGCCTCCAAAAGGGAGTCATAGAAGTAGTTCATGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAACCTCACAGTGTTGATGTATTGCTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGAGACCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCCACAAGTCTTCCGTTTTGGGAAAATGTGTGTGATTTTGACATGTCTTGCATTGGGAAGGAGCTTGTCATAGATGCTGCCCGAATTCCTATAGTTGATGTTGTGGACTCTCAAGATTTAGTTACCAGTTCTGCGATTCTTCAGTCCTTTGACTTGGCAACCATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAATTGAAACCAAGTGCTTCAGGAACATGCTGCTGGTGTTATGGCATTGTCGTATGGTTTGAAACTGGATTTACAAGCAGATTCTGCCGAGAAACACCAGCTGTGTTATCCACATCCCCCTACACTTCAAGAACACATTGGTCACAAACAATCTTAACCTTTCGAGAACCTATTGCGATGGGATTTGGAAAAGAAAACGGGGGTAAACCAGAAGCAATCGGCACTGAGGTGTATCCTGCTGCGAAGATTGATTTACGTGTCAGCATTGTCCGTTCTACTGAGCATCGCAGCATTGACATTTCCTTAGAAGCTGCTGGTGTTGGTCCTGATGGTCAGAAACGTAGTTGGCCTGCTCAGCTTTTTAATCTGCAGTAG 1887 0.4282 MAFSDKQKQEEEEEPHRMEEDEDDASEEEEEEEEEVWDDWEGEDEGERESEFVCLFCDSRYSSCGSLFDHCASLHHFDFHAIRATLSLDFYASFKLINFIRSNVAENRCWSCGLTCQSNRDLQNHLHEVVDFNEIKTLWNDDRYLIPFMQDDSLLYSFGECDEEGEDEQITQIDEDLIKDLMNIEESICADQEAVKKVVVDDGKHDASVSNDHLNRASSSNKELINGKNSRGHVSCSDKDPGGGPLIANSQNHIAKHIKKVNESYFGSYSSFGIHREMLSDKARMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMAAVASQVAKDNGLLLSKSQNGVDGLQKGVIEVVHGMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWENVCDFDMSCIGKELVIDAARIPIVDVVDSQDLVTSSAILQSFDLATMKPNEVDFTATATLELKPSASGTCCWCYGIVVWFETGFTSRFCRETPAVLSTSPYTSRTHWSQTILTFREPIAMGFGKENGGKPEAIGTEVYPAAKIDLRVSIVRSTEHRSIDISLEAAGVGPDGQKRSWPAQLFNLQ 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00261 628 FunFam Probable protein arginine N-methyltransferase 3 426 622 - -
Pumo11g00261 628 SUPERFAMILY beta-beta-alpha zinc fingers 32 170 IPR036236 -
Pumo11g00261 628 MobiDBLite consensus disorder prediction 212 232 - -
Pumo11g00261 628 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 268 568 IPR029063 -
Pumo11g00261 628 MobiDBLite consensus disorder prediction 1 44 - -
Pumo11g00261 628 CDD AdoMet_MTases 304 422 - -
Pumo11g00261 628 MobiDBLite consensus disorder prediction 15 44 - -
Pumo11g00261 628 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 262 580 IPR025799 GO:0016274|GO:0018216
Pumo11g00261 628 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 55 610 IPR025799 GO:0016274|GO:0018216
Pumo11g00261 628 FunFam Protein arginine N-methyltransferase 6 258 423 - -
Pumo11g00261 628 Gene3D Vaccinia Virus protein VP39 253 423 IPR029063 -
Pumo11g00261 628 MobiDBLite consensus disorder prediction 209 238 - -
Pumo11g00261 628 Pfam C2H2 type zinc-finger (2 copies) 54 128 IPR041661 -
Pumo11g00261 628 Pfam Methyltransferase domain 304 419 IPR041698 -
Pumo11g00261 628 Gene3D - 425 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00261 Pumo-Chr11 9653278 9658137 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00261 27 627 C2H2 Transcription Factor Family AT3G12270 55.769 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00261 K11436 - gmx:100781879 1067.76