Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo11g00258 | ATGAGACGGTGGGGTCGTCGATTATCCTCCAATTTCAACCGCTTGGGTCTGGGAAGAAGAAGTATAGCATCCACTTCTTCCAATGACTCCTGCAGCATCCAAAACTATAGATACGATGTATTTATCAGTTTCAGAGGTCCTGACACCCGCAACACTTTTGTTGATCATCTCTACGCTCATCTCATCCGAAAGGGTATTTTCGTCTTTAAGGATGACAAAAGGCTCCACAAAGGAGACTCCATTTCAGCACAACTTCTGCAAGCAATCAAAGATTCACGGGTTTCTATCATCATCTTTTCGGAAAATTATGCTTCCTCCACATGGTGTTTAGATGAAATGGCTGCTATAGCTGATTGCAAACAACAATGGAACCAAACTGTTTTCCCCGTTTTCTACGATGTGGATCCATCTCATGCAAGACATCAGAACGGGGCATACGAGAATGCTTTTGTTTTACACAGATTGAAATTCCAACAACAAGATCCAGACAAGGTCCATCGGTGGGAGAGAGCTATGACGGATTTGGCCAATTTAGCTGGCTGGGATTTCAGGAACAAGGCAGAGTATGAAGAGATTGAAAATATTGTTCAAGCGGTAATAAAAAAATTGGGTCATAAATTTTCAGGATTTGCCGATGACCTTATTGGAATACAACCACGTGTACAAGCATTAGAAAACATTTTAGAATTAAACTCAGAGAATGATGATTTTCATGTTTTAGGAATTTGGGGGATGGGCGGAATAGGAAAGACAACTCATGCTGCTGTCTTGTATGATAAAATCTCTCATAAGTTTGATGCTTGTTGTTTCATTGAGAATGTTAGCAAAATTTACCGGGATGGTGGCCATACTGCTGTACTAGAAACAAATTGTTCGTCAAACTTTAGGAGAAAAAAATCTAGAAATATATAG | 912 | 0.3991 | MRRWGRRLSSNFNRLGLGRRSIASTSSNDSCSIQNYRYDVFISFRGPDTRNTFVDHLYAHLIRKGIFVFKDDKRLHKGDSISAQLLQAIKDSRVSIIIFSENYASSTWCLDEMAAIADCKQQWNQTVFPVFYDVDPSHARHQNGAYENAFVLHRLKFQQQDPDKVHRWERAMTDLANLAGWDFRNKAEYEEIENIVQAVIKKLGHKFSGFADDLIGIQPRVQALENILELNSENDDFHVLGIWGMGGIGKTTHAAVLYDKISHKFDACCFIENVSKIYRDGGHTAVLETNCSSNFRRKKSRNI | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo11g00258 | 303 | SMART | till_3 | 37 | 178 | IPR000157 | GO:0007165 | |
Pumo11g00258 | 303 | Gene3D | - | 211 | 301 | IPR027417 | - | |
Pumo11g00258 | 303 | Pfam | TIR domain | 38 | 206 | IPR000157 | GO:0007165 | |
Pumo11g00258 | 303 | Pfam | NB-ARC domain | 224 | 278 | IPR002182 | GO:0043531 | |
Pumo11g00258 | 303 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 28 | 181 | IPR035897 | - | |
Pumo11g00258 | 303 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 34 | 205 | - | - | |
Pumo11g00258 | 303 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 211 | 295 | IPR027417 | - | |
Pumo11g00258 | 303 | ProSiteProfiles | TIR domain profile. | 36 | 203 | IPR000157 | GO:0007165 | |
Pumo11g00258 | 303 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 38 | 276 | IPR044974 | GO:0006952 | |
Pumo11g00258 | 303 | Gene3D | - | 35 | 210 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo11g00258 | Pumo-Chr11 | 9554515 | 9556972 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo11g00258 | 38 | 288 | WRKY Transcription Factor Family | AT4G12020 | 29.365 | 5.30e-24 | 100 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo11g00258 | - | - | gmx:100807905 | 437.187 |