Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00252 ATGATTTTTCTAATATATTTATTCTTTGTTTTCCAGGGAACAGATAATGTTAAAGCCATAGTTTTGAATCTAAAAGAAGATATCTTCAAATGTGAGGTTGATGGATTGTCAAAAATGAAGAATCTTAGATTGCTCATACTATATCATCAAAAATTTTCAGGAAGCCTCAATGCTCTTTCCCATGAGCTGCGGTATCTTTTGTGGCATTGTTATCCTTTTGCTTCTTTGCCATCAAATTTTACGGCCGTTAATCTTGTGGAATTGAATATGCCCAATAGTAGCATCAAACAAGTTTGGGAAGGCCCCAAGTATTTCCCCTGTCTGAAAAGGATGGATTTGAGCAACTCCAAATATCTTGTAGAGACTCCAGATTTTTCCGGGATCCCAAAACTCGAGAGGCTTGATCTTTCAGGGTGCACAAATTTATTATTTGTCTATTCATCAATTGGACATCTTGAAAAACTTGCTTTCTTGAGTTTACGAAATTGTAGCAGTCTAGTCAACATCCACTTTGGATGGGGATCTAATCTAAGTTCTCTGATAGTTCTACATTTCTCTGGTTGCACTAAACTTGAAAACATGCCAGATTTTACAAGTGCAACAAATCTCAAGTACCTTGACTTTGAGGGATGTACAAGTTTAACCTTGGTTCATGAATCTATTGGGGCTCTTTTAAAACTCACATTCTTGAGTTTGAGAGACTGCAAAAATCTTGTTAGTATACCTAACAGCATTAATACCATGATATCTCTTCAAACTCTAGATTTATGTGGCTGTTTGAAACTTACGGATTTGCCCGTAAAACAAGCTTTCAAATCTATATCGTTGGTATCTTTGATATTTTTGGACATAGGATTTTGCAATCTACTCGAAGTACCTGATGCTATCATAGTGTTAGGGTGTTTAGAAAGATTGAATCTACAGGGAAACAATTTTGTTTCAATACCATATTGTTCCCTCAGTTGCATACCTCGTCTAGCATATTTAAAATTGTCGCATTGCCATGAGCTTGTAACTTTGCTTAACCTTCCATCAGGGAGGGATTCATTAAGGGGAAGGTATTTTAAAATGGTATCCGGATCTCGTGATCATAGGTCAGGTTTATATGTTTTTGATTGTCCCAAGGTGGTTGATATGGACATGGAACTTGAATGGTTTGTAAGGCTAATTGAGGAGCCTTGTCATTTTCTGTGTGGCTTTGACATTGTTGTTCTTTGGGATTGGAGAATTAAAACTTCACGGTGGTTCTGTACAGATTTTGTCAGGGGGGCGCATATCAGTTTTAAAGCTCACCCACGTATTGAAATCATTAAATGGGGGATGAGGAGTATATTCCGGCAAGATATAGATGATCTTAAAAAAAAGATGCAACAAGGAGTACCTCTTCAATCCAATGATGCACACTATGTAGAGAAAAGCAAAAGCAAAAGCAACTATGTGCCTAAAATACAGCTTCCTTACAATTGGTTGGTCACAGAGGAAGACAAAGTTGAGAATATTAAAGCAAAGACAAAAGAAAATAATCTCTTATGTGGGGCTTTAAATACGCTAGCCAAGATAAACATCTTTTTTGGACCCAAGGTAGTGAGGAGGGCAATGGGGACAGGTCTTGGAAATATTGTAAGAGATCATGAGGGGGCAGATTTGGAGGGGGAACACACCGAAAAGGATGTTCCCGCAGCACCAAATACTGTTGTGGTTATTGATTCAGATGAGGAAGATGATAGAGATAAAATTTCTGTTGTTCCATTTCATGAAGTTGTGTTGCTAAGAATAGTTGGACCATCTCCTGCATTGAAGATGATTGATCTAGATAGCAAATCTAGAGGGAGTGAATAG 1839 0.3752 MIFLIYLFFVFQGTDNVKAIVLNLKEDIFKCEVDGLSKMKNLRLLILYHQKFSGSLNALSHELRYLLWHCYPFASLPSNFTAVNLVELNMPNSSIKQVWEGPKYFPCLKRMDLSNSKYLVETPDFSGIPKLERLDLSGCTNLLFVYSSIGHLEKLAFLSLRNCSSLVNIHFGWGSNLSSLIVLHFSGCTKLENMPDFTSATNLKYLDFEGCTSLTLVHESIGALLKLTFLSLRDCKNLVSIPNSINTMISLQTLDLCGCLKLTDLPVKQAFKSISLVSLIFLDIGFCNLLEVPDAIIVLGCLERLNLQGNNFVSIPYCSLSCIPRLAYLKLSHCHELVTLLNLPSGRDSLRGRYFKMVSGSRDHRSGLYVFDCPKVVDMDMELEWFVRLIEEPCHFLCGFDIVVLWDWRIKTSRWFCTDFVRGAHISFKAHPRIEIIKWGMRSIFRQDIDDLKKKMQQGVPLQSNDAHYVEKSKSKSNYVPKIQLPYNWLVTEEDKVENIKAKTKENNLLCGALNTLAKINIFFGPKVVRRAMGTGLGNIVRDHEGADLEGEHTEKDVPAAPNTVVVIDSDEEDDRDKISVVPFHEVVLLRIVGPSPALKMIDLDSKSRGSE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00252 612 Gene3D Ribonuclease Inhibitor 271 352 IPR032675 -
Pumo11g00252 612 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 179 343 IPR044974 GO:0006952
Pumo11g00252 612 Pfam Leucine Rich Repeat 84 101 IPR011713 -
Pumo11g00252 612 Gene3D Ribonuclease Inhibitor 15 169 IPR032675 -
Pumo11g00252 612 SUPERFAMILY L domain-like 34 403 - -
Pumo11g00252 612 Gene3D Ribonuclease Inhibitor 172 270 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00252 Pumo-Chr11 9381969 9390295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00252 175 334 WRKY Transcription Factor Family AT4G12020 35.000 2.62e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00252 - - var:108332841 530.02