Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00243 ATGTATGGGAGTAAAGCTTGCCAACTTGTGAAAGAATTTGCAAGTGGAGAAAAGGGTCAGCTTACCTTGTACAATAATGACTTGTTTCGAGAAGTAGTTGCAGAGTGCACTCAACATCACCTTGATCTTCAGTCCTTGATAAGGAAGATGCAGGAAGAAGGTTTGGATATTCAAACGGCAAAAAATGCAGATCACTACGGAGCCCTTATCCACCATCTTGCTTTAGTCCGAAATAAACGTTGCCTAATGGCCTATATGTATAATCGAGCAGAAATTATACGAAACTTGTTGTGGAAGATAGGGCATGTGCTTCCTCAAGAAATTAAAGTGAAGCTTTGTAATACGGAGGAAGAACATTTCAAGAAGCATTCTAAAGCATTGAAATCTTATATGTTGAAAGTGGAGGTTGATTTGACTGTGGATATGGTACCACCAAAAGATCCTTACATCAAAGTAAGGGTCATTGATGACATTGGAGAAGGCATTCTGCTTAGTGATGATAAGAGTGCCAATTTTGCCCTCCATTCAATGCACCTTTTGAAGCGAACTGATGCAGAGCAATTTATCTCACAGGGCAAAATGCAGGAGCTCACGGGTTGA 600 0.4033 MYGSKACQLVKEFASGEKGQLTLYNNDLFREVVAECTQHHLDLQSLIRKMQEEGLDIQTAKNADHYGALIHHLALVRNKRCLMAYMYNRAEIIRNLLWKIGHVLPQEIKVKLCNTEEEHFKKHSKALKSYMLKVEVDLTVDMVPPKDPYIKVRVIDDIGEGILLSDDKSANFALHSMHLLKRTDAEQFISQGKMQELTG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00243 199 CDD GINS_B_Psf1 148 197 - -
Pumo11g00243 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Pumo11g00243 199 PANTHER PARTNER OF SLD5 1 198 IPR005339 GO:0000811|GO:0006260
Pumo11g00243 199 CDD GINS_A_psf1 3 135 IPR005339 GO:0000811|GO:0006260
Pumo11g00243 199 Pfam GINS complex protein 21 105 IPR021151 -
Pumo11g00243 199 Gene3D - 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00243 Pumo-Chr11 8085597 8089822 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00243 1 199 Core DNA Replication Machinery Family AT1G80190 66.832 3.99e-99 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00243 K10732 - gmx:100780798 386.341