Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00210 ATGATGCTGTGTGGAGGAGCTTCATCTTCTGCCTTTGGTCGTGGATGGACTTATGATGTGTTCTTGAGTTTCAGAGGTGAAGATACAAGGAGAAGCTTCACAGGGTCTCTATATCATGGTTTGCGCCAAAGGGGTATCAATGTTTTCATAGATGATGAGAAGCTTAGGAGAGGGGAAGACATATCCCCTGCTCTTATTGGAGCCATTGAAGAGTCTAGGATTGCTATCATTGTGTTCTCTCAAAACTATGCATCTTCCACATGGTGTCTTGATGAGCTTGCAAAGATCCTTGAGTGTTACAAGACAAGGGGGCAACTTGTTTGGCCAGTTTTCTTTCATGTGGACCCTTCTGTGGTGCGCCATCAGAGAGGAAGTTTTGAGACAGCAATGGCTAAGCATGAAGTCAGGTTCAAGGGTGATGTGGAAAAGTTGCAAAAGTGGAAGAGGGCCTTGTTTGAGGCAGCCAATTTGTCAGGTTGGACCTTAGACAATGGGTATGAATTTGAGCTTATCCAAGAGATCATTGAGGAGGCCTCTAGAAAATTAAATCACACCATATTGCATATTGCTGAATACCCAGTTGGAATAGAGACTCGCATATCAGAAGTGAAGTCACTTTTGCATATTGAACCCAGTGAAGATATTCGTGTCATTGGAATCTATGGACTTGGAGGCATAGGTAAAACCACAATTGCAAGGGCCTTATACAACTTGATTGCTGGCCAGTTTGAAGCTACAAGTTTCCTTGCTGATATAAGAGAAAGTTCAAATCAAAGACAAGGCTTAGTGCAACTTCAAGAAGCACTTCTTTTTGATACAGGAACTTATAGAATTCAAGGCATGATGGTGGACCTCCCTGAACAATATATGGTACACTTGGAAGATGATTCCTTCAAAAAGATGAAAAATCTTAAAATTCTTATAGTTCGAAGTGGACACTTTTTTGGAAGCCCCCAACATCTTCCAAACAATTTAAGGTTGCTTGATTGGATGGAATATCCTTCATCATCTCTACCATCTAGTTTTCAACCTAAGAAACTTGTTGTACTCAACTTGTCGCGCAGTCGTTTTACAATGCAAGAGCCATTCAAGTATTTGGATTCTTTGACTTCTATGGACTTGAGTCACTGTGAATTGTTGACAAAACTGCCTGACATTTCCCGAGTCCCAAATTTAACAGAACTAAATCTTGACTATTGTACAAATTTAGAAGAGGTTCATGACTCTGTTGGATTCCTTGAGAAACTTGTTGAGTTGAGGGCTTATGGATGCACCAAGCTTAAGGTTTTTCCAAGTGCCCTCAGGTTGACATCATTGAGAAGTCTTATCCTTAATTGGTGCTCAAGCCTTCAAAATTTCCCTGCTATTTTGGGGAAGATGGATAACCTCATATCCATGTCTATAGAAGGCACTGGTATAAAAGAATTGCCTCCTTCCATTGGAAACCTTGTTGGACTTCAAGAATTGAGCATGACATCTTGCTTAAGCCTCAAGGAACTGCCTGACAACTTTGATATGCTGCAAAATCTTAGAAACCTTGATATTGAAGGCTGTCCGCAACTTCGAAGTTTTTTGACAAAGTTGAGAGACATGGGACAATCTACCCTTACCTTTGGTAACATTCAGTCACTGAATCTAGAAAACTGTGGCCTTATAGATGAAGATCTTCCCGTAATTTTCCATTGCTTCCCAAAAGTAGCATCATTAGTCCTTTCAGGAAATGATTTTGTTGCTCTTCCAAGATGCATACAAGAATTTCCTTGCTTGGAATTACTTCACTTGGACAACTGCAAAAAACTCCAAGAAATTCCAGTATTTCCTCCTAACATACAGTACATTAATGCAAGAAATTGTATATCATTGACTGCAAAGTCATCAAACTTATTATTGAGCCAGGAAACTTTTGAGGCACATGAAATGCAAGTTATGGTGCCTGGAACAAGGGTTCCAGAATGGTTTGATCACATCACCAAAGGAGAATATATGACATTTTGGGTACGTGAAAAGTTTCCAGCAACTATCTTATGCTTTGCTCTCGCGGTAGAGAGTGAAATGAAGGAGAGTTTCAATTGTGAAATTCGCTTCTATATAAATGGTGATGAAGTTTATGAATTGGAAATGCCAAGATACTTTTCAGAAATGGTGACAGATCATGTGTGGCTGTATGACTTGAGAACTCATCCATCCATCCAGTGGCATAGTCTTGATTTATATCTAATGGATGACTGGAATCAGGTTGAGATTTCATGTGAGAAGATAAGTGGAGCATCAAATGTGACTGTGAGTTGGTGTGGAGTTCATGTGTGTAAGCAAGAAGCTGACATGAAGGATATACTTTTTACAGATCCTGATCCGGATTTAGATTCAAGCAGACACTCTGAAAAGATTGATACAGATTTGGATTCAAACAGTGAAGAAAGCACAAAGTCAATTGAAGATTCCCAATATTGCAACAGAGTAGATGGTAACTGCTACAATTTCAATAACTTGGAAGGTTGTGAGCACACTGGATAG 2514 0.3974 MMLCGGASSSAFGRGWTYDVFLSFRGEDTRRSFTGSLYHGLRQRGINVFIDDEKLRRGEDISPALIGAIEESRIAIIVFSQNYASSTWCLDELAKILECYKTRGQLVWPVFFHVDPSVVRHQRGSFETAMAKHEVRFKGDVEKLQKWKRALFEAANLSGWTLDNGYEFELIQEIIEEASRKLNHTILHIAEYPVGIETRISEVKSLLHIEPSEDIRVIGIYGLGGIGKTTIARALYNLIAGQFEATSFLADIRESSNQRQGLVQLQEALLFDTGTYRIQGMMVDLPEQYMVHLEDDSFKKMKNLKILIVRSGHFFGSPQHLPNNLRLLDWMEYPSSSLPSSFQPKKLVVLNLSRSRFTMQEPFKYLDSLTSMDLSHCELLTKLPDISRVPNLTELNLDYCTNLEEVHDSVGFLEKLVELRAYGCTKLKVFPSALRLTSLRSLILNWCSSLQNFPAILGKMDNLISMSIEGTGIKELPPSIGNLVGLQELSMTSCLSLKELPDNFDMLQNLRNLDIEGCPQLRSFLTKLRDMGQSTLTFGNIQSLNLENCGLIDEDLPVIFHCFPKVASLVLSGNDFVALPRCIQEFPCLELLHLDNCKKLQEIPVFPPNIQYINARNCISLTAKSSNLLLSQETFEAHEMQVMVPGTRVPEWFDHITKGEYMTFWVREKFPATILCFALAVESEMKESFNCEIRFYINGDEVYELEMPRYFSEMVTDHVWLYDLRTHPSIQWHSLDLYLMDDWNQVEISCEKISGASNVTVSWCGVHVCKQEADMKDILFTDPDPDLDSSRHSEKIDTDLDSNSEESTKSIEDSQYCNRVDGNCYNFNNLEGCEHTG 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00210 837 Gene3D Ribonuclease Inhibitor 308 451 IPR032675 -
Pumo11g00210 837 Gene3D Ribonuclease Inhibitor 452 638 IPR032675 -
Pumo11g00210 837 Gene3D - 186 307 IPR027417 -
Pumo11g00210 837 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Pumo11g00210 837 SUPERFAMILY L domain-like 280 631 - -
Pumo11g00210 837 Pfam TIR domain 18 185 IPR000157 GO:0007165
Pumo11g00210 837 MobiDBLite consensus disorder prediction 782 808 - -
Pumo11g00210 837 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 460 620 IPR044974 GO:0006952
Pumo11g00210 837 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pumo11g00210 837 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Pumo11g00210 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 277 IPR027417 -
Pumo11g00210 837 Gene3D - 12 185 IPR035897 -
Pumo11g00210 837 SMART till_3 17 157 IPR000157 GO:0007165
Pumo11g00210 837 MobiDBLite consensus disorder prediction 782 812 - -
Pumo11g00210 837 PRINTS Disease resistance protein signature 217 232 - -
Pumo11g00210 837 PRINTS Disease resistance protein signature 505 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00210 Pumo-Chr11 6351869 6356243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00210 265 531 WRKY Transcription Factor Family AT4G12020 36.897 3.52e-35 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00210 - - gmx:100798893 1049.65