Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00202 ATGGCCACTGAAAAGCTTAGATGCTGTGGAAACTTCCTTGAGAACTCTAAACCCTACTTTGCCATGATTGCCTTACAGTTTGGCTATGCAGGCATGAACATTATCACTAAGGTTTCCCTCAACCGTGGCATGAGCCACTATGTGCTTGTTGTTTATCGCCATGCCTTTGCCACTGCTGTCATTGCTCCATTTGCCTTCATCTTTGAAAGGAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCTAGCTCTACTTGGGCCTGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAATTAACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTGCCTGCCATGACTTTTGTGATGGCAGTTTTATGCCGGATGGAGAAGATCAACATGAAGAAGGTGAGATGCCAAGCAAAGGTGGTGGGAACATTGGTGACGGTGGCTGGGGCCATGTTGATGACCTTGTACAAAGGCCCTATAGTGGAGATGGTTTGGACCAAACATGCACATCATCATGGGCAAATCAATAATGCAACAAATACCACATCATCTTCAGACAAGGATTGGTTCATAGGCTCGATCTTCCTAATCATTGCCACTCTTGCCTGGGCATCCCTCTTTGTTTTACAAGCCAAAGCCATTGAAACCTACAAAAATCACCAGCTAAGCCTCACATCACTTATCTGCTTCATTGGCACTCTTCAAGCTATTGCTGTTACTTTTGTTATGGAACACAAGCCATCCATGTGGACTATTGGCTGGGATATGAACTTACTTGCCGCTGCCTATGCTGGGATTGTTTCATCAAGCATATCATACTACGTCCAAGGATTGGTAATTAAGAAGAAAGGGCCTGTATTCGCAACTGCGTTTAGCCCTCTGATGATGATAATTGTAGCCATCATGGGCTCCTTTCTCCTTGCAGAGCAGATTTTTCTTGGAGGTGTGCTTGGTGCCATCTTCATCGTTATAGGCTTATACTCAGTTCTTTGGGGAAAGCACAAAGAACAAGTGGAGAAGAAAGTGGCAGAGGATATACCCTTGCCTGTAAAGGGTGCTCAACTTGATGGAAAACCAGGATCACTTATTACTGATTCCACTGATCAGAAATCTGATTCCAACAAGTTCTCTTCACATATAATTAATGTGCCTATCACTGAGCCTCCCATGAAATCTAACAATTAA 1200 0.4342 MATEKLRCCGNFLENSKPYFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFIFERKAQPRITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVLCRMEKINMKKVRCQAKVVGTLVTVAGAMLMTLYKGPIVEMVWTKHAHHHGQINNATNTTSSSDKDWFIGSIFLIIATLAWASLFVLQAKAIETYKNHQLSLTSLICFIGTLQAIAVTFVMEHKPSMWTIGWDMNLLAAAYAGIVSSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFLLAEQIFLGGVLGAIFIVIGLYSVLWGKHKEQVEKKVAEDIPLPVKGAQLDGKPGSLITDSTDQKSDSNKFSSHIINVPITEPPMKSNN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00202 399 MobiDBLite consensus disorder prediction 362 381 - -
Pumo11g00202 399 Pfam EamA-like transporter family 196 335 IPR000620 GO:0016020
Pumo11g00202 399 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Pumo11g00202 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 340 - -
Pumo11g00202 399 PANTHER WAT1-RELATED PROTEIN 18 346 IPR030184 GO:0016020|GO:0022857
Pumo11g00202 399 MobiDBLite consensus disorder prediction 365 381 - -
Pumo11g00202 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00202 Pumo-Chr11 6161522 6165111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00202 1 398 Nodulin-like Gene Family AT5G07050 67.397 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00202 - - gmx:100804359 720.694