Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00194 ATGCTCTATCAATGGTTCCTTAGCATCAAATTGATCTACCTTCTTTGCTTTGCTGCTGCTGCTGTTCAGAACAGTAGCAATACACAACCACTTGATTACAGATATGCTTGTTTGGACCAATCTTCTGTTCCTCCCTCTACCACATACCAAACCAACCTCAACAATCTGATATCTTCACTCTTATCTGATTCTGCAACAAGCAATGGTTTTGGGAGTAGAACTTCAGGTGACAATCAAAACAACATGGTTTATGGACTCTATCTTTGCCGTGGTGATGTGAACACCAGCCTTTGCCACTCATGTGTCCAAAACTCTAGCAGATGGCTCAAGCAGCAGTGCCCCAATAATGCCTCAGCCATTTTGTGGTACCCCTTTTGTATTCTGAGGTACTCAAACCAGAACTTCTTTGGCAACCTCACCATAAGACCGAGGATTCCTATGCTTGATGCGACAAAAAATTTTACTAGTGCTGGAGAATTTGACGGTGATGCTAGGATTTTGATGAATGGCTTGATACAAATGGGGTCAAAGACACTCTTAATGTTTGGGACACATATGTTCAACATAAATGGCACTCAGAGAAGGTATGGCTGGGTGCAGTGCAGCAGAGATATCACTAGTGAGGAATGCAGAACATGTTTGAGTAATATGCTTGAGGATGTTGAAAATTGCTGTGAGGAGAAGAAGGTGTGGCGAATCTTTTCTCCAAGCTGTGTTGTGATGTATGAGACTGAACCATTCTTTTTGAATAATCAACTGCCTGTTGCGCCAGCACCTCAGCAAGACAAAAAAGCCAAGCAAGAAGATGGACTAAATTCAATATTTTGTGAAGATCAGACTGATATGGAGGAGACTGTGAATGCTGACCTTCCTTTCATGCCTTTGAATACTATTCTAAAAATTACAAATAACTTTTCTGATGAATATAAATTGGGGAAAGGTGGATTTGGCTCTGTCTACAAGGGTGTTTTACCTGATGGAACGCAAATTGCTGTCAAAAGGCTTTCAAAAACTTCAGTTCAAGGTGTGAAGGAATTCAAAAATGAAGTGATATTGATTGCAAAATTGCAGCACCGAAACCTTGTGAGACTGCTGGCATGCTGCATTGAGAAAAATGAAAAGATGCTTATCTATGAATACATGCCAAATTCAAGCCTTGACTTCCACTTATTTGATATGGATAAGGGTGCAAAGCTGGATTGGAAACAACGATCAAACATTATTAATGGCATTGCTAAGGGGCTTCTATATCTTCATGAAGACTCTAGACTCAGGATTATCCACAGAGACCTGAAAGCTAGCAATATTCTATTAGATCATGAAATGAATCCAAAAATCTCAGACTTTGGACTGGCAAGAACATTTGGAGGAGACCAGAGGGAGGCAAATACAACTAGAGTTGTGGGAACTTATGGATACATGGCCCCTGAGTATGCCATGGAAGGCTTGTTTTCAGTGAAGTCGGATGTTTTCAGCTTTGGTGTTCTTCTGCTAGAGATCATCAGTGGAAAAAGGATCAGCAAATTCCATCTATTTTACCATGGCAAAGGCCTTCTCGTATATGCATGGAACCTCTGGTGTGAAAGAAAAGCTTTGGAATTGATGGATCCGTTGCTAGAAAAATCATGTGTGTGTAATGAAGTTCTAAAGTGTATCCACATTGGTCTATTGTGTGTACAAGAAGATGCTGCAGATAGACCAACAATGTCAAGTGTTGTTCATATGCTTGCAAGTGACAATGTGACTCTCCCAAGCCCGACTCGTCCTGCATTTTCTGTTGGAAGGGTTGTCATTGAACAAGGGACATCACCAAACACTTGTGGTCATTACTCTGTCAATGAAGTAACCCTCTCCGAAGTAACACCTAGGTGA 1872 0.4103 MLYQWFLSIKLIYLLCFAAAAVQNSSNTQPLDYRYACLDQSSVPPSTTYQTNLNNLISSLLSDSATSNGFGSRTSGDNQNNMVYGLYLCRGDVNTSLCHSCVQNSSRWLKQQCPNNASAILWYPFCILRYSNQNFFGNLTIRPRIPMLDATKNFTSAGEFDGDARILMNGLIQMGSKTLLMFGTHMFNINGTQRRYGWVQCSRDITSEECRTCLSNMLEDVENCCEEKKVWRIFSPSCVVMYETEPFFLNNQLPVAPAPQQDKKAKQEDGLNSIFCEDQTDMEETVNADLPFMPLNTILKITNNFSDEYKLGKGGFGSVYKGVLPDGTQIAVKRLSKTSVQGVKEFKNEVILIAKLQHRNLVRLLACCIEKNEKMLIYEYMPNSSLDFHLFDMDKGAKLDWKQRSNIINGIAKGLLYLHEDSRLRIIHRDLKASNILLDHEMNPKISDFGLARTFGGDQREANTTRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGKRISKFHLFYHGKGLLVYAWNLWCERKALELMDPLLEKSCVCNEVLKCIHIGLLCVQEDAADRPTMSSVVHMLASDNVTLPSPTRPAFSVGRVVIEQGTSPNTCGHYSVNEVTLSEVTPR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00194 623 FunFam Cysteine-rich receptor-like protein kinase 28 33 134 - -
Pumo11g00194 623 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 271 380 - -
Pumo11g00194 623 Gene3D Transferase(Phosphotransferase) domain 1 381 583 - -
Pumo11g00194 623 Pfam Domain of unknown function (DUF3403) 578 623 IPR021820 GO:0004674
Pumo11g00194 623 Gene3D - 146 247 IPR038408 -
Pumo11g00194 623 Gene3D - 31 135 IPR038408 -
Pumo11g00194 623 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 381 584 - -
Pumo11g00194 623 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Pumo11g00194 623 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Pumo11g00194 623 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Pumo11g00194 623 ProSiteProfiles Protein kinase domain profile. 305 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00194 623 Gene3D Phosphorylase Kinase; domain 1 267 380 - -
Pumo11g00194 623 SMART serkin_6 305 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00194 623 SUPERFAMILY Protein kinase-like (PK-like) 290 593 IPR011009 -
Pumo11g00194 623 Pfam Salt stress response/antifungal 42 133 IPR002902 -
Pumo11g00194 623 Pfam Salt stress response/antifungal 152 244 IPR002902 -
Pumo11g00194 623 CDD STKc_IRAK 311 576 - -
Pumo11g00194 623 FunFam Cysteine-rich receptor-like protein kinase 10 145 247 - -
Pumo11g00194 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Pumo11g00194 623 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 618 - -
Pumo11g00194 623 Pfam Protein tyrosine and serine/threonine kinase 309 576 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00194 Pumo-Chr11 4882477 4886154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00194 28 591 Receptor kinase-like Gene Family AT4G05200 41.735 8.01e-161 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00194 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00194 - - gmx:100798691 1034.25