Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00167 ATGTCGGGGAGTTCTTCTTCAGTTGTTGTGTCTCCTTCTCTAATTAGGCATGACGTGTTCCTCAACTTCAGAGGGGAAGACACCCGTGACACCTTCATTAGTTACCTTTATGCAGAACTAGGCAGGAATTATATTGAAACATATATAGATGGCAGACTAGGCAGGGGCGAAGAGATTTCACCTGCACTGCACAAAGCAATAGAGGAATCAAAGATTTATGTCCTCGTTTTCTCCGAAAATTATGCATCTTCCACATGGTGTTTGGATGAACTCACAAAGATACTCGATTGCAAGAAGAGGTATGGAAGAGATGTCATACCAGTTTTCTATAACGTGGATCCATCAACTGTTAGGAAGCAGAGAGAGAGATATGCAGAAGCATTTGTTGAGCATGAACACCGATTTAAGGACAACATGGAAAAAGTGCACGCATGGAAGACTTCTCTAACTGAAGCCGCTGGACTCTCGGGCTGGGATTCACAAGTAACCAGACCAGAAAACAGATTTGTTGAAGAAATTGTGAAAGATATTTTGAGAAAATTGAATCGTTTCTCCATACGTGACCATCAAGGAATTATTGGAATTGACAACCATATTGCACGAATCCAGTCCCTGTTGCACCTTGAGTCACCGGCTACTCGGATCATAGGAATTTGGGGCATGGGAGGAATAGGAAAAACAACGATTGCTAGTCAAATACATCACATATTGGCAGAGCTATTTGGTTCCAGAAGCATTGTTTTAAACGGTCAAGAAGAAATAGAAAGGCATGGAATACACCATATCAGAAGCAAATATTTATCAGAGCTTCTAGAGGAAGACCACACATCCTCTGGATTAAGTTTTTCGTATGAAAGGCTCAAACGGATAAGGGTTCTCCTTACTCTTGATGATGTGAACAATTTGGGTCAACTAAAAGAATTAATTGGAGGGCGTGGTAACTTTGGCCAGGGCAGTAGAATCATTGTGACCAGTAGAGACATGCAAGTGCTCAAGAATGTTGAAGCTGATGAAATCTATGAAGTCAAGGAGATGAATTTTCAAGATTCTCTAAAACTGTTCAGTTTAAATGCTTTTAAACAAAACCATCCAAGAGAAGCTTACATGGACTTATCAGTAAAGGTATTGAATTATGCCAAAGGGATTCCATTAGCTCTCAAGGTTTTGGGCTCATTGCTTTATCTTAGAACAAGGGAAACATGGGAAAGTGAGTTGCAAAAGTTGGAAAAGCTTCCTGAATTTGAAATTTTCAATGTATTAAAATTTAGTTATAATGGGCTTGACGAGCAGCAGAAGGATATATTTCTTGACATAGCTTGCTTTTATAGAGGATCTGAGGAGATTGTCGTGGCAGAAATGCTAGATAGCTGTGGTTTCTCTGCTAAGATTGGAATGGATGTTCTCAAAGACAGGTGCCTAATATCTGTTTTGGAAGGTAGAATTGTGATGCATGATCTAATACAAGAAATGGGACAAGAGATTGTTCGTCAACAATGTGTCAATAATCCTGGAAAGCGCAGTCGATTGTGGAAGGTTGAGGAAATTTATCATGTTTTAAGAAAGAACAAGTGTTTACCCAAGTTGAAAAGGCTGGACCTGAGTTATTCTCGGAAACTAAAAAGAATACCGGACCTCTCGCTATCACCAAGTATTGAAGAAATAATTCTCAGTGATTGTGTAAGCTTGATTGAGGTGTACTTCAGAGGTTTCCTCAGCAAGCTCAATTGTTTACGTTTAAATGGCTGTGTTGAGCTTTGGAGTTTAATTATTCGGAGCAATATTCTATCGAGATCATCAGGTTTAATTTTCCTTTCCAATTGTCGCATGCTTGAAACATTTTCAATCAGCAACAGTCACCCTCCTATTCTTGGGATGCGCAGAGAAATCAGTGTTAGAAGCCGTTCTACCAAATGTGAAGAAGTGGTGAATAATATAGATTACACTGAAGTGTTGACAGAAGGCATGTCTTCAATATTTCCAAGTTCGAATGAGTTGGGTTGGTTAGATTTCTCTAATTGTGAATCCCTTACAATACTTCCAATTGACCTTTCTAATTTCAAATTCCTAGAAAGACTTCATCTCGGTGGTTGCTCAAATTTGGAAAATTTTCCCGAAATTAAGGGAGGAATGGAAAATCTAACGGTGCTCCGCTTAGACCGGACAGCAATACGGGAACTACCTTCGTCCTTGTGCCGTTTGGTGGGGCTTGAAGAATTGAGCTTGCAAAGGTGCACAAGTCTTGAGATTGTTCCATCTTCCATTGGAAGTCTCAGCAAACTCTGCAAGTTAGACCTTACCTACTGTGAATCACTTGAAACTTTTCCCAGCAGCATTTTCAAATTGAGGTTGATGAAACTTGTTTTGTATGGTTGCTCAATGCTAAGGACCTTCCCAGATATCTTGGAGCCTGCACCAAGTTTTGCTCACATTGACTTGACAAAAACGGCGGTTAAAGAACTACCTTCATCATTTGATAATCTGGTTGGTCTTCGAACCCTGCGTCTGAACATGTGCACTGATCTTGAGTTGCTTCCAAGCAGCATTGTTAATCTAAACCTTCTCTCCGAGCTTGATTGTTCAGGGTGTTCCAAATTAACGGAAATCCCAGGTGACATTGGTCGCTTATCGTTATTAAGGGAACTGTCACTGCATGAGAGCGGAATTGTAAACCTTCCTGATAGCATTGCTCATCTTTCAAGCTTGAAATCACTCGATTTAAGCGATTGCGTTAAGCTTGAATGCATCCCAATGCTTCCGCCGTTTCTAAAACAATTATTGGCATTTGATTGTCCATCCATTCAAAGAGTGATGCCATATTCAAGGATTCCAACCTCATCAGATTCCACAGAGGGTATGTTCAAATTTCATCTCACCAATAGTCAACAACTGGATCCAAGTGCTCGTGTTAATATTGGGAATGATGCATGGCTGAGAATGACCCAGGAAGCATATAGGTCTGTGTTCTTTTGTTTTCCAGGGAGTGCAGTTCCTCATTGGTTCCCTTTTCGTAGCCAGGGACATTCAGTAACTATGAGTACAGATTCTCTAAATTTGTGCAATGATAATAGGCTCATTGGTTTTGCTTTGTGTGTCGTTTTCAGACTCTTGGATATCGATGATACAAAAGGTAGACATGGTTTTTTCAGTTACAGAATAAGATTTGAATCTGATGATGGCATGTACATTCTTCCCGACCATGATGAGCTAAGAAACCATTTCTATTGGAAGGGTAGAGAGAGAATAGTTGATCAAGATCACACATTCCTATGGAAATATAACTTGGAATCCACAAGCATGAGCCTTATGCTCAGTCATGCTCACTGCTTCACTTTCGAGATCCGCCAATATGATTATGGCTTTCGGAGGCAGCCATATTTCAAATCAATTGTCACAATAAAAAAATGTGGAATATGCCCTCTTTATACCAAATAA 3432 0.4001 MSGSSSSVVVSPSLIRHDVFLNFRGEDTRDTFISYLYAELGRNYIETYIDGRLGRGEEISPALHKAIEESKIYVLVFSENYASSTWCLDELTKILDCKKRYGRDVIPVFYNVDPSTVRKQRERYAEAFVEHEHRFKDNMEKVHAWKTSLTEAAGLSGWDSQVTRPENRFVEEIVKDILRKLNRFSIRDHQGIIGIDNHIARIQSLLHLESPATRIIGIWGMGGIGKTTIASQIHHILAELFGSRSIVLNGQEEIERHGIHHIRSKYLSELLEEDHTSSGLSFSYERLKRIRVLLTLDDVNNLGQLKELIGGRGNFGQGSRIIVTSRDMQVLKNVEADEIYEVKEMNFQDSLKLFSLNAFKQNHPREAYMDLSVKVLNYAKGIPLALKVLGSLLYLRTRETWESELQKLEKLPEFEIFNVLKFSYNGLDEQQKDIFLDIACFYRGSEEIVVAEMLDSCGFSAKIGMDVLKDRCLISVLEGRIVMHDLIQEMGQEIVRQQCVNNPGKRSRLWKVEEIYHVLRKNKCLPKLKRLDLSYSRKLKRIPDLSLSPSIEEIILSDCVSLIEVYFRGFLSKLNCLRLNGCVELWSLIIRSNILSRSSGLIFLSNCRMLETFSISNSHPPILGMRREISVRSRSTKCEEVVNNIDYTEVLTEGMSSIFPSSNELGWLDFSNCESLTILPIDLSNFKFLERLHLGGCSNLENFPEIKGGMENLTVLRLDRTAIRELPSSLCRLVGLEELSLQRCTSLEIVPSSIGSLSKLCKLDLTYCESLETFPSSIFKLRLMKLVLYGCSMLRTFPDILEPAPSFAHIDLTKTAVKELPSSFDNLVGLRTLRLNMCTDLELLPSSIVNLNLLSELDCSGCSKLTEIPGDIGRLSLLRELSLHESGIVNLPDSIAHLSSLKSLDLSDCVKLECIPMLPPFLKQLLAFDCPSIQRVMPYSRIPTSSDSTEGMFKFHLTNSQQLDPSARVNIGNDAWLRMTQEAYRSVFFCFPGSAVPHWFPFRSQGHSVTMSTDSLNLCNDNRLIGFALCVVFRLLDIDDTKGRHGFFSYRIRFESDDGMYILPDHDELRNHFYWKGRERIVDQDHTFLWKYNLESTSMSLMLSHAHCFTFEIRQYDYGFRRQPYFKSIVTIKKCGICPLYTK 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00167 1143 Gene3D - 345 428 IPR042197 -
Pumo11g00167 1143 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 158 IPR035897 -
Pumo11g00167 1143 SUPERFAMILY L domain-like 647 929 - -
Pumo11g00167 1143 PRINTS Disease resistance protein signature 286 300 - -
Pumo11g00167 1143 PRINTS Disease resistance protein signature 215 230 - -
Pumo11g00167 1143 PRINTS Disease resistance protein signature 379 393 - -
Pumo11g00167 1143 PRINTS Disease resistance protein signature 896 912 - -
Pumo11g00167 1143 Gene3D - 184 342 IPR027417 -
Pumo11g00167 1143 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Pumo11g00167 1143 SMART till_3 16 155 IPR000157 GO:0007165
Pumo11g00167 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 438 IPR027417 -
Pumo11g00167 1143 Gene3D Ribonuclease Inhibitor 783 935 IPR032675 -
Pumo11g00167 1143 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 613 IPR044974 GO:0006952
Pumo11g00167 1143 Pfam TIR domain 17 185 IPR000157 GO:0007165
Pumo11g00167 1143 Gene3D Ribonuclease Inhibitor 489 782 IPR032675 -
Pumo11g00167 1143 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pumo11g00167 1143 SMART LRR_typ_2 710 733 IPR003591 -
Pumo11g00167 1143 SMART LRR_typ_2 757 781 IPR003591 -
Pumo11g00167 1143 SMART LRR_typ_2 525 549 IPR003591 -
Pumo11g00167 1143 SMART LRR_typ_2 875 898 IPR003591 -
Pumo11g00167 1143 Pfam C-JID domain 991 1142 IPR045344 -
Pumo11g00167 1143 SUPERFAMILY L domain-like 482 617 - -
Pumo11g00167 1143 Gene3D - 15 183 IPR035897 -
Pumo11g00167 1143 SUPERFAMILY "Winged helix" DNA-binding domain 415 519 IPR036390 -
Pumo11g00167 1143 Pfam NB-ARC domain 197 410 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00167 Pumo-Chr11 4181572 4187581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00167 756 916 WRKY Transcription Factor Family AT4G12020 31.902 5.93e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00167 - - lja:Lj4g3v3099550.1 1196.42