Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00160 ATGGGGTCTCAAGGTGGTGGTGATAACAATGGAAAACATTCACAACTCCAGCCTTTGGTGCGGCAAAATTCAATGTACAGTCTCACACTTGATGAAGTTCAGAATCAGTTAGGTGACTTAGGGAAACCACTAAGTAGCATGAACCTTGATGAGCTTCTAAAAAATGTGTGGACCGCCGAGGAAAACCAGTCCACTGGTGTGGACATTGAGGGTACAGCTCAAACTGGTCAAGCTGCGCTGCAGCGTCAGGCTAGTCTGTCGTTAACTAGTGCGCTAAGCGGGAAGACTGTTGATGAGGTTTGGAGGGATATACAACAAAGCAAAGATAACAAGGACAAGAAGTCTCAAGTGAGACAGTCTACATTGGGAGAGATGACATTGGAGGATTTCTTGGTAAAAGCAGGGGTTGTTGCCGAAGCATCTTCTAATAGGAAGAATACTGGTGCTACAGTCGGTTTTGATTCAAATGTAGCGGCACCACAGTTTCCTCAGCATGGTCCTTGGATACAGTATCCACAACCACAATATCAGCATCCACAACAAGGTTTAATGGGGATTTATATGCCTGGCCAGAATATAACACAGCCATTACACATGGGAGCTGGTGCTGCATCAGATGTTCCGTATGCAGATGGTCAGGTGGCATTGTCTTCACCTGTTATGGGAACCTTGTCAGATACTAGGAGACCTGGGAGAAAACGGGGCACGTCCGAGGACATGGTAGAGAAGACTGTTGAGAGGAGGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCTAGAGCAAGGAAACAGGCTTACACAACTGAATTGGAGCACAAAGTCTCGCGTTTGGAAGAGGAAAATGAAAAGCTGAGGAGACAGCAGGAACTAGAGAAAATGTTGTCAAGCACTCCACCTCCTGAACCTAGATACCAGATTCGCCGAACATCGTCGGCTTCATTCTGA 954 0.4675 MGSQGGGDNNGKHSQLQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEENQSTGVDIEGTAQTGQAALQRQASLSLTSALSGKTVDEVWRDIQQSKDNKDKKSQVRQSTLGEMTLEDFLVKAGVVAEASSNRKNTGATVGFDSNVAAPQFPQHGPWIQYPQPQYQHPQQGLMGIYMPGQNITQPLHMGAGAASDVPYADGQVALSSPVMGTLSDTRRPGRKRGTSEDMVEKTVERRQKRMIKNRESAARSRARKQAYTTELEHKVSRLEEENEKLRRQQELEKMLSSTPPPEPRYQIRRTSSASF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00160 317 MobiDBLite consensus disorder prediction 227 293 - -
Pumo11g00160 317 Pfam bZIP transcription factor 247 296 IPR004827 GO:0003700|GO:0006355
Pumo11g00160 317 Coils Coil 266 297 - -
Pumo11g00160 317 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 290 IPR004827 GO:0003700|GO:0006355
Pumo11g00160 317 SMART brlzneu 243 299 IPR004827 GO:0003700|GO:0006355
Pumo11g00160 317 CDD bZIP_plant_BZIP46 247 296 - -
Pumo11g00160 317 Gene3D - 245 300 - -
Pumo11g00160 317 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 315 IPR043452 GO:0003700|GO:0045893
Pumo11g00160 317 SUPERFAMILY Leucine zipper domain 247 292 IPR046347 GO:0003700|GO:0006355
Pumo11g00160 317 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Pumo11g00160 317 MobiDBLite consensus disorder prediction 221 317 - -
Pumo11g00160 317 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 245 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00160 Pumo-Chr11 3987575 3991100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00160 17 317 bZIP Transcription Factor Family AT3G56850 55.049 3.08e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo11g00160 bZIP_1 2.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00160 K14432 - gmx:100784924 561.607