Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00151 ATGGAGGCCTCAAAACGTTTGCCTATGGCTAGGAAAGGAGTTGGATCCAAGGGAGAGACCAGACAGCTATTAGCTAACCATTTTAGAATTCGCCTAGCCAGGCCCAACAATGATTTTGATGGCTACTTCTACCATTATAGTGTTGCCATGAGTTACGAAGATGGACACCCAGCTGAAGCCAAGGGTATGGGGAGAAAAGTCCTAGATCAAGTTTGTAAAACATACGATGAACTGAGGAACACAAATTTTGCATACGATGGTGAGAAAAGTTTATTCACTCTTGGTTGTCTACCAAGTCAGAATCTTCAATACACTGTTGTGATAGAAGTTGTTTCAGCAAGGAGGGTTGGAAGGGAAGGAAACCCTGATGATCATCAGAGTCATGATGAAGGAGATGCAAAAAGAATGAAGCGTCAATCTTGGACCAAAACCATCTTTGTGGATATCAAATATGCAGCCAAAATCCCATTGCAAGCAGTTGCAGATGCATTGCGTGGTCAGGATTCTGAGAACTCTCAGGAAGCACTGAGGATTCTGGACATCATACTGAGACAACATGCTGCAAGCAAGGGATGCCTCCTTGTTCGCCAATCCTTCTTTCATAACAATGATCCAAACATTGATGACGACATAGGAGGTGATGTGTCAACTACAATGATTGTAAAGCCTGGCCCTGTGGTGGATTTCCTTCTTGAGAATCAGAGTGTTCAGAATCATGACCCAAACAGAATTGACTGGAACAAGGGAAAAAGAATGCTGAAGAACCTGAGAATCAAGGCTAATGGTATTGAGTTCAAAATCACTGGACTAAGTGATAAAACCTGCAGGAATCAGACGTTTCTATTAAAGCAAAAGGATGCAAATGGTGAAGTGCAGGAAAGTGAAATCACGGTTTATGACTACTTTACACGCCATAAAATTAGTAGCTTGAACGACTCTGCTGATATGCCATGCATCAATGTTGGCAAACCGAAACGCCCGTGTTATTTTCCAATAGAGCTATGTAAGTTGGTCCCGTTGCAGCGGTACACCAAGGCACTAACAAATTGGCAAAGGAGTAAGCTAGTTCTGAAGACAAGGCTAGAGCCCCATCGTAGACATGAACAATTGCAACATGTACCAAGCATAAGATATGATGATGAACCTATGCTTCACTCTTCTGGGATTACCATTGAACCTAACCTTACTAGAATCAATGCTCGTATACTGCAACCCCCACAGCTTATAGTTGGAGGGGAAAAAATCATCATTCCCCGGAATGGGCGCTGGAATTTCAACAATAAGTTGAACAAAGTTTAG 1299 0.4249 MEASKRLPMARKGVGSKGETRQLLANHFRIRLARPNNDFDGYFYHYSVAMSYEDGHPAEAKGMGRKVLDQVCKTYDELRNTNFAYDGEKSLFTLGCLPSQNLQYTVVIEVVSARRVGREGNPDDHQSHDEGDAKRMKRQSWTKTIFVDIKYAAKIPLQAVADALRGQDSENSQEALRILDIILRQHAASKGCLLVRQSFFHNNDPNIDDDIGGDVSTTMIVKPGPVVDFLLENQSVQNHDPNRIDWNKGKRMLKNLRIKANGIEFKITGLSDKTCRNQTFLLKQKDANGEVQESEITVYDYFTRHKISSLNDSADMPCINVGKPKRPCYFPIELCKLVPLQRYTKALTNWQRSKLVLKTRLEPHRRHEQLQHVPSIRYDDEPMLHSSGITIEPNLTRINARILQPPQLIVGGEKIIIPRNGRWNFNNKLNKV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00151 432 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 15 428 - -
Pumo11g00151 432 Gene3D paz domain 217 343 - -
Pumo11g00151 432 ProSiteProfiles PAZ domain profile. 265 339 IPR003100 GO:0005515
Pumo11g00151 432 Pfam PAZ domain 235 355 IPR003100 GO:0005515
Pumo11g00151 432 SUPERFAMILY PAZ domain 218 373 IPR036085 GO:0005515
Pumo11g00151 432 Pfam N-terminal domain of argonaute 22 183 IPR032474 -
Pumo11g00151 432 CDD PAZ_argonaute_like 223 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00151 Pumo-Chr11 3784792 3787687 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00151 6 428 Eukaryotic Initiation Factors Gene Family AT1G48410 27.233 1.41e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00151 K11593 - gmx:100812218 583.948