Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00140 ATGGGTTCTAATAGGCCATTTCTAATGACACCATCTCCAACAACAACTTCTACTAGTAACTACCAACAAGACCCTCTCACCTCTATTCCTGAGCTTACAAAATCAAAGTCAAGTTCCAGCAACGCCTTCAACCCATTTGAGAACACTCTCAACTCATCATCACGCAGAAGTTCTATGTCCATTCACTCTTCTGGGAGCAGGAGCAACAACTCTATCCAAGAAGTGAGTTTGAGCCGTTCAGGATCCAAATCCAAACCTGTTAGATATGGCTCAAAGGGTGCAGATTCTGAAGGACTCAGCATGTCACAAAGGGAGCTAAGAGATGAGGATGCAAGGTTAGTGTACATAAACGACCCTTTGAAAACCAACGAGACTTTTGAGTTTGCAGGGAACTCTATCCGCACAAGCAAATACTCCCTCCTCACTTTCATTCCCAGGAACCTTTTTGAACAGTTCCACAGGGTTGCTTACGTGTACTTTCTCATAATTGCCATTCTCAACCAGATTCCTCAGCTTGCAGTGTTTGGAAGAGGTGTTTCCATCTTGCCACTAGCCTTTGTGCTGTTTGTCACAGCTGTGAAGGATGTGTATGAGGATTGGAGAAGGCACAAGAGTGATAAAGTTGAGAACGATAGGTTAGCATCAGTTTTGGTTGATGGAAAATTTGTGGAGAAGAACTGGAGGGATGTTAGAGTTGGTGAGGTGATAAAGATCAAGGCAAATGAAACCATCCCTTGTGATATTGTGTTGCTCTCAACTAGTGATCCAACTGGGGTTGCATATGTGCAGACTATTAATCTTGATGGGGAGTCCAATTTGAAGACAAGGTATGCAAAGCAAGAGACGCATGGTAAGGAGGGGTTTGGTGGAGTGATTAAGTGTGAAAAACCCAATAGGAACATTTATGGATTTCTGGCTAACATGGAAGTTGATGGCAAGAAGTTGTCACTTGGATCCTCCAACATTGTGCTTCGTGGATGTGAACTCAAGAATACTAGTTGGGCTATTGGTGTTGCTGTGTACTGTGGGAGTGAGACCAAGGCTATGCTGAATAGCGCAGGAGCTCCTTCTAAGAGGAGCAGGTTGGAGACACGCATGAATTATGAGATCATTTGGCTCTCTTTCTTCCTTGTGGCATTGTGTACAGTCACCTCAGTTTGTGCTGCTGTGTGGTTGAAGCGCCACAAGGATGAGTTGAATCTGTTGCCATATTATAGGAAACTGGACTTTTCAGAAGAGGTGGAGGGGGATAGCTATGAGTACTATGGATGGGGGTTGGAAGTTTTCTTCACATTCCTCATGTCAGTTATAGTTTTCCAGGTCATGATTCCCATTTCCTTGTACATTTCCATGGAGCTTGTGAGGGTTGGTCAGGCCTACTTCATGATCGGAGACAACAGAATGTATGATGAGGAAACAAAGTCAAGGTTTCAGTGCAGGGCTTTGAACATTAATGAAGATTTGGGGCAGATTAAGTATGTTTTCTCTGACAAAACTGGTACTCTCACTCAGAACAAGATGGAGTTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGTTCTAAAGAGAACATCATGGAGGGGGATGAGCTAGTTGAACATTCTGTGGAAGTGAATGGAAAGATCTTCAAACCAAAGAAGAAGGTGAAAGTTAATCCAGAGCTTTTGCAACTATCAAGAAGTGGATTTCAAAATGTGGAAGGAAAACGGATTCATGATTTCTTTCTAGCACTGGCAACCTGCAACACTATTGTGCCTCTTGTTGTTGACTCACCTGATCCTGATGTCAAGCTGATAGATTACCAAGGAGAATCACCAGATGAACAAGCACTAGCTTATGCTGCTGCTGCCTATGGTTTTATGCTCATAGAACGAACCTCTGGCCATATAGTCATTGATATTCATGGACAAAGACAAAAGTTCAATGTCTTGGGTTTGCATGAATTTGACAGTGACAGGAAGAGAATGTCAGTTATATTGGGGTGCCCTGACAATTCTGTGAAAGTTTTTGTCAAAGGAGCAGACACATCCATGCTTAATGTGATACACAGGTCATTTAACATAGACTTAGTAAAATCAACTGAAGCACATCTTCACTCTTACTCTTCCGTGGGTTTGAGGACACTTGTTATTGGCATGAGAGACTTGAATGCTTCAGAATTTGAGCAATGGCATGCATCCTTTGAGGCAGCAAGCACTGCTGTGTTTGGCAGGTCTGCGATGCTCCGCAAGGTTGCTAGCAGTGTAGAGAACAGTCTCAGCATATTGGGAGCATCTGCCATTGAAGATAAACTGCAACAAGGTGTGCCTGAATCCATTGAGTCTCTAAGGATTGCAGGCATTAAAGTATGGGTTCTGACTGGGGACAAACAAGAAACTGCCATATCCATTGGCTACTCCTCAAAGCTCCTAACAAGCAACATGACTCAGATTATAATCAATAGCAACAACAGAGAATCATGCAGAAAAAGTTTGCAAGATGCCCTTGTCATGTCTAAAAAGCTCATGTCCACATCTGGGGTTGCCAACAATGCTGGAGGAAGTTCACATGCAACTCCAGTAGCCTTGATTATTGATGGTACCAGCCTTGTGCATATTCTTGACAATGAACTTGAAGAACAGCTATTTCAACTTGCAAGTAGATGTTCTGTTGTTCTATGTTGCCGAGTTGCTCCACTGCAAAAGGCTGGGATTGTTGCCCTTGTGAAGAATAGGACATCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTAGGCAAGCTGTAATGGCATCTGATTTTGCAATGGGACAGTTTAGGTTTTTGGTTCCTCTCTTATTGATACATGGGCACTGGAATTACCAACGGCTGGGTTACATGATACTGTACAATTTTTACAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTTCACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCAGCACGTTATACTCAATAATCTACAGTTCATTACCAACTATAATTGTTGGTATTCTCGACAAGGATCTTGGTAAAAGGACTCTCCTAAAGTATCCTCAACTATATGGGGCAGGACAGAGACATGAGGCCTACAACAAGAAATTATTTGTGCTGACAATGTTAGATACTTTGTGGCAAAGCATGGTTATCTTCTGGGCACCCCTCTTTGCATATTGGAGTAGCACAGTTGATGTGGCAAGCATTGGAGACCTTTGGACTCTTGGAGTTGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCACAAGGTGGTATTGGGTGACCCATGTTGTCATTTGGGGGTCTATTGTTGCAACTTTCATTAGTGTCATGATCATTGATGCTATCCCCAATCTTCCTGGCTACTGGGCCTTCTTTCATGCTGCAGGAACTGGATTGTTCTGGTTATTGTTGCTTGGAATAATAGTAGCAGCATTGCTTCCACGTTTGGTTGTAAAATTTGTTTATCAATATTATTTTCCTAATGATATTCAGATTTGTAGAGAAGCTGAGAAGATTGGGTATGAGAGAGTTGTTGAAAGTGGACAGATAGAAATGCTTCCTATCTCAGATAATCCATCAAGATAA 3645 0.4247 MGSNRPFLMTPSPTTTSTSNYQQDPLTSIPELTKSKSSSSNAFNPFENTLNSSSRRSSMSIHSSGSRSNNSIQEVSLSRSGSKSKPVRYGSKGADSEGLSMSQRELRDEDARLVYINDPLKTNETFEFAGNSIRTSKYSLLTFIPRNLFEQFHRVAYVYFLIIAILNQIPQLAVFGRGVSILPLAFVLFVTAVKDVYEDWRRHKSDKVENDRLASVLVDGKFVEKNWRDVRVGEVIKIKANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHGKEGFGGVIKCEKPNRNIYGFLANMEVDGKKLSLGSSNIVLRGCELKNTSWAIGVAVYCGSETKAMLNSAGAPSKRSRLETRMNYEIIWLSFFLVALCTVTSVCAAVWLKRHKDELNLLPYYRKLDFSEEVEGDSYEYYGWGLEVFFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIGDNRMYDEETKSRFQCRALNINEDLGQIKYVFSDKTGTLTQNKMEFQCASIWGVDYSSKENIMEGDELVEHSVEVNGKIFKPKKKVKVNPELLQLSRSGFQNVEGKRIHDFFLALATCNTIVPLVVDSPDPDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGQRQKFNVLGLHEFDSDRKRMSVILGCPDNSVKVFVKGADTSMLNVIHRSFNIDLVKSTEAHLHSYSSVGLRTLVIGMRDLNASEFEQWHASFEAASTAVFGRSAMLRKVASSVENSLSILGASAIEDKLQQGVPESIESLRIAGIKVWVLTGDKQETAISIGYSSKLLTSNMTQIIINSNNRESCRKSLQDALVMSKKLMSTSGVANNAGGSSHATPVALIIDGTSLVHILDNELEEQLFQLASRCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTLTTAINEWSSTLYSIIYSSLPTIIVGILDKDLGKRTLLKYPQLYGAGQRHEAYNKKLFVLTMLDTLWQSMVIFWAPLFAYWSSTVDVASIGDLWTLGVVILVNLHLAMDVTRWYWVTHVVIWGSIVATFISVMIIDAIPNLPGYWAFFHAAGTGLFWLLLLGIIVAALLPRLVVKFVYQYYFPNDIQICREAEKIGYERVVESGQIEMLPISDNPSR 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00140 1214 FunFam Phospholipid-transporting ATPase 600 733 - -
Pumo11g00140 1214 FunFam Phospholipid-transporting ATPase 752 953 - -
Pumo11g00140 1214 SFLD p-type atpase 479 964 IPR044492 -
Pumo11g00140 1214 SUPERFAMILY Calcium ATPase, transmembrane domain M 128 1180 IPR023298 -
Pumo11g00140 1214 MobiDBLite consensus disorder prediction 1 103 - -
Pumo11g00140 1214 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 103 1191 - -
Pumo11g00140 1214 Gene3D - 752 953 IPR023214 -
Pumo11g00140 1214 PRINTS P-type cation-transporting ATPase superfamily signature 495 509 - -
Pumo11g00140 1214 PRINTS P-type cation-transporting ATPase superfamily signature 913 932 - -
Pumo11g00140 1214 Gene3D - 185 351 - -
Pumo11g00140 1214 MobiDBLite consensus disorder prediction 1 85 - -
Pumo11g00140 1214 Pfam Phospholipid-translocating ATPase N-terminal 114 180 IPR032631 -
Pumo11g00140 1214 CDD P-type_ATPase_APLT_Dnf-like 130 1073 - -
Pumo11g00140 1214 Pfam E1-E2 ATPase 213 452 - -
Pumo11g00140 1214 SFLD Haloacid Dehalogenase 479 964 - -
Pumo11g00140 1214 Pfam Cation transport ATPase (P-type) 591 679 - -
Pumo11g00140 1214 Pfam Phospholipid-translocating P-type ATPase C-terminal 941 1181 IPR032630 -
Pumo11g00140 1214 FunFam Phospholipid-transporting ATPase 186 351 - -
Pumo11g00140 1214 NCBIfam phospholipid-translocating P-type ATPase 128 1188 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo11g00140 1214 NCBIfam HAD-IC family P-type ATPase 427 516 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo11g00140 1214 NCBIfam HAD-IC family P-type ATPase 884 999 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo11g00140 1214 SUPERFAMILY HAD-like 490 968 IPR036412 -
Pumo11g00140 1214 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 719 IPR023299 GO:0000166
Pumo11g00140 1214 Gene3D - 601 732 IPR023299 GO:0000166
Pumo11g00140 1214 SUPERFAMILY Calcium ATPase, transduction domain A 211 348 IPR008250 -
Pumo11g00140 1214 ProSitePatterns E1-E2 ATPases phosphorylation site. 497 503 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00140 Pumo-Chr11 3653827 3659662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00140 59 1214 Primary Pumps ATPases AT5G04930 68.362 0.0 1689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00140 K14802 - gmx:100813982 2117.43