Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00136 ATGGCCACTCACCCTTTGATGCTTGTGATCACTATTTTCAACCTTGTAATGTTCTTCTCTCAAATTTCCACAGCAATAGACACCATCACCCAGTCTCAGCCACTCCATGATGATGGCAGCACCTTAGTTTCCAACAATGGAACCTTTGAGTTGGGGTTCTTCAGCCCCGGTGGTAGTTCCACAAACCGCTACATAGGAATTTGGTACAAAATCATCCAAGTTAGAACCATTGTTTGGGTTGCCAACCGTGACAACCCAATCAAAAACAACACCACCACCATGTTAACCATAGCCAAAGAGGGAAACCTTGTGCTTCTCAACAACAACAACAATCAAACACTTTGGTCAACAAACATCACATCATCATCCACAACAAATCAGCCTTTGTTGAATCCCATGGTTCACCTCTTAGACACTGGAAACTTGGTACATAAAGAAGCCAACAACAACAACAATGATGAAAGTTTTTTTTTGTGGCAAAGCTTTGACCACCCTTGTGACACTCTCTTGCCAGGAATGAAGCTTGGATGGGACCTAAAAAGGGGTCTTAATAGGAAATTAGTTGCATGGAAGAGTTGGGATGACCCTTCTTCAGGAAACTTGAGTTGGGGTATGGTCCTTAGTAGCAACCCTGAATTGGTCCTTTGGAATGGTTCAATTGAGTACCATAGGAGTGGGCCTTGGAATGGGCCAGGGTTTAGTGGCCAGCCCGTGTTGAGGATCACTCCAATTGTTGACACCAAATTTGTCAACAATTCAAATGAGGTTTATTACTCCTACACCCTTAGGAACAAGTCCGTGATCTCAATCACTTACTTGAACCAAACCCTTTCTCATCGCCAACGCATGACGTGGCTTCCCGAGAACAAAACTTGGAGGGTTTATGAGTCCGTGCCTAGAGATAGTTGTGACCCATATAACCCTTGTGGCCCAAATGGAAATTGCATGGTTAATGAGACCCCAATTTGCCAGTGTTTAGAAGGGTTTGAACCAAAATTGCCTCAGAATTGGAACACCTTTGATTGGACACAAGGATGTGTGCGTAGTGAACCTTGGAGTTGTGGGGTGAAAAACCAAGATGGTTTTCGTAGATTTGCCTCTATGAAAGTGCCAGATACAAGAAATTCTTGGACCTATGGAAATATGACACTTGAGGATTGTAGGGTCAAATGCTTGGAAAATTGTTCTTGCATGGCTTATTCAAACTTGGACATAAGGGGAGGTGGGAGTGGTTGTTCCATTTGGTTTAGTGATCTTATTGATTTGAAATTGATTCAAGCAAGCCAGCAAGATTTATATATTCGAATGGCTATTCCAGCTTCAAATGAAGATACAAAAAAGAAGGCTTTAGTAATTACGATCCCAATTGTATCAGTCACCATTTTGCTACTCGTCGTCTTCTTTTATATTTACAAAGGCAGAAGAAAGCAAAGAGGAATAGAAGATGAAACAAATAACACCATATCAACTGAAAAGAAAGATGAAGACGAAGATCAAGATTTTGAGCTTCCTTTCTTTGATCTTGCTACAATATATAATGCTACCAATGGCTTCTCAAATGACAATAAGCTTGGAGAAGGTGGTTTTGGGCCAGTATATAAGGTACACATTGCTGTCAAAAGGCTTTCAAAGACTTCTAGACAAGGAATGAAAGAATTCAAGAATGAAGTTAGATTGTGTATCAAACTTCAACACCGAAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGAAGAGGAGAAAATGTTACTCTATGAATATATGCCCAACAAAAGCCTAGATTCATTTCTTTTTGATTCAACTCAAAGTAAACTTCTAGATTGGTCTACGCGGTTCCGCATCATGTGTGCAATTGCTCGTGGACTTCTTTATCTACACCAAGATTCTAGATTGAGGATCATACATAGAGATCTAAAAGCAAGCAACATTTTGTTAGACAATGATATGAATCCAAAAATTTCAGATTTTGGCTTAGCAAGACTTTGTGGAGATGATCAAATTGAAGGGAATACAAATAGAGTAGTTGGGACATATGGTTATATGGCACCAGAATATGCCATTGATGGGTTATTCTCCATAAAATCTGATGTATTCAGCTTTGGCATATTATTGCTAGAGATCATAAGCGGAAAGAAAAATAGAGGACTTACATACACAGGCGACGATGATTATAATCTTATTGGGCATGCATGGAGATTGTGGAAAAAAGGAAATCCAATAGAACTGATTGATGATTGTTTGGGGGACTCGTATGTTATATTAGAAGCCTTACGTTGCATACAAGTTGGTCTTTTATGTATACAACATCATCCATATGATAGACCTAACATGGCATCTGTGGTTGTTATGTTGACCAACGAAACTATTTTAGCTCAACCAAAGGAGCCTGATTTCTTATTAGAAAGGGTCATCCCTAGTGAAGTAGAATCTTCTCCTGGAAAGCAAATCTCTTCTTCAGTTAATGAAGTATCTATTTCACAATTGGATGCTAGATAA 2496 0.3946 MATHPLMLVITIFNLVMFFSQISTAIDTITQSQPLHDDGSTLVSNNGTFELGFFSPGGSSTNRYIGIWYKIIQVRTIVWVANRDNPIKNNTTTMLTIAKEGNLVLLNNNNNQTLWSTNITSSSTTNQPLLNPMVHLLDTGNLVHKEANNNNNDESFFLWQSFDHPCDTLLPGMKLGWDLKRGLNRKLVAWKSWDDPSSGNLSWGMVLSSNPELVLWNGSIEYHRSGPWNGPGFSGQPVLRITPIVDTKFVNNSNEVYYSYTLRNKSVISITYLNQTLSHRQRMTWLPENKTWRVYESVPRDSCDPYNPCGPNGNCMVNETPICQCLEGFEPKLPQNWNTFDWTQGCVRSEPWSCGVKNQDGFRRFASMKVPDTRNSWTYGNMTLEDCRVKCLENCSCMAYSNLDIRGGGSGCSIWFSDLIDLKLIQASQQDLYIRMAIPASNEDTKKKALVITIPIVSVTILLLVVFFYIYKGRRKQRGIEDETNNTISTEKKDEDEDQDFELPFFDLATIYNATNGFSNDNKLGEGGFGPVYKVHIAVKRLSKTSRQGMKEFKNEVRLCIKLQHRNLVKVLGCCIQEEEKMLLYEYMPNKSLDSFLFDSTQSKLLDWSTRFRIMCAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARLCGDDQIEGNTNRVVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIISGKKNRGLTYTGDDDYNLIGHAWRLWKKGNPIELIDDCLGDSYVILEALRCIQVGLLCIQHHPYDRPNMASVVVMLTNETILAQPKEPDFLLERVIPSEVESSPGKQISSSVNEVSISQLDAR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00136 831 CDD B_lectin 38 165 IPR001480 -
Pumo11g00136 831 Pfam Domain of unknown function (DUF3403) 785 831 IPR021820 GO:0004674
Pumo11g00136 831 SUPERFAMILY Protein kinase-like (PK-like) 499 798 IPR011009 -
Pumo11g00136 831 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 588 792 - -
Pumo11g00136 831 ProSiteProfiles PAN/Apple domain profile. 354 437 IPR003609 -
Pumo11g00136 831 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 162 - -
Pumo11g00136 831 Gene3D Transferase(Phosphotransferase) domain 1 588 795 - -
Pumo11g00136 831 Pfam PAN-like domain 354 422 IPR003609 -
Pumo11g00136 831 SMART blect_4 32 165 IPR001480 -
Pumo11g00136 831 Gene3D Hepatocyte Growth Factor 353 435 - -
Pumo11g00136 831 MobiDBLite consensus disorder prediction 808 831 - -
Pumo11g00136 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 196 IPR036426 -
Pumo11g00136 831 CDD STKc_IRAK 524 786 - -
Pumo11g00136 831 Pfam S-locus glycoprotein domain 224 332 IPR000858 GO:0048544
Pumo11g00136 831 SMART ntp_6 357 436 IPR003609 -
Pumo11g00136 831 SMART serkin_6 518 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00136 831 Pfam D-mannose binding lectin 76 191 IPR001480 -
Pumo11g00136 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Pumo11g00136 831 CDD PAN_AP_plant 353 437 - -
Pumo11g00136 831 Gene3D Phosphorylase Kinase; domain 1 479 587 - -
Pumo11g00136 831 Gene3D - 20 162 IPR036426 -
Pumo11g00136 831 Pfam Protein tyrosine and serine/threonine kinase 521 781 IPR001245 GO:0004672|GO:0006468
Pumo11g00136 831 MobiDBLite consensus disorder prediction 810 831 - -
Pumo11g00136 831 ProSiteProfiles Protein kinase domain profile. 518 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00136 831 ProSiteProfiles Bulb-type lectin domain profile. 26 157 IPR001480 -
Pumo11g00136 831 ProSiteProfiles EGF-like domain profile. 299 335 IPR000742 -
Pumo11g00136 831 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 775 - -
Pumo11g00136 831 PIRSF SRK 1 831 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00136 Pumo-Chr11 3633753 3637205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00136 450 799 Receptor kinase-like Gene Family AT4G23190 51.667 2.45e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00136 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00136 - - tpra:123915417 1089.72