Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo11g00136 | ATGGCCACTCACCCTTTGATGCTTGTGATCACTATTTTCAACCTTGTAATGTTCTTCTCTCAAATTTCCACAGCAATAGACACCATCACCCAGTCTCAGCCACTCCATGATGATGGCAGCACCTTAGTTTCCAACAATGGAACCTTTGAGTTGGGGTTCTTCAGCCCCGGTGGTAGTTCCACAAACCGCTACATAGGAATTTGGTACAAAATCATCCAAGTTAGAACCATTGTTTGGGTTGCCAACCGTGACAACCCAATCAAAAACAACACCACCACCATGTTAACCATAGCCAAAGAGGGAAACCTTGTGCTTCTCAACAACAACAACAATCAAACACTTTGGTCAACAAACATCACATCATCATCCACAACAAATCAGCCTTTGTTGAATCCCATGGTTCACCTCTTAGACACTGGAAACTTGGTACATAAAGAAGCCAACAACAACAACAATGATGAAAGTTTTTTTTTGTGGCAAAGCTTTGACCACCCTTGTGACACTCTCTTGCCAGGAATGAAGCTTGGATGGGACCTAAAAAGGGGTCTTAATAGGAAATTAGTTGCATGGAAGAGTTGGGATGACCCTTCTTCAGGAAACTTGAGTTGGGGTATGGTCCTTAGTAGCAACCCTGAATTGGTCCTTTGGAATGGTTCAATTGAGTACCATAGGAGTGGGCCTTGGAATGGGCCAGGGTTTAGTGGCCAGCCCGTGTTGAGGATCACTCCAATTGTTGACACCAAATTTGTCAACAATTCAAATGAGGTTTATTACTCCTACACCCTTAGGAACAAGTCCGTGATCTCAATCACTTACTTGAACCAAACCCTTTCTCATCGCCAACGCATGACGTGGCTTCCCGAGAACAAAACTTGGAGGGTTTATGAGTCCGTGCCTAGAGATAGTTGTGACCCATATAACCCTTGTGGCCCAAATGGAAATTGCATGGTTAATGAGACCCCAATTTGCCAGTGTTTAGAAGGGTTTGAACCAAAATTGCCTCAGAATTGGAACACCTTTGATTGGACACAAGGATGTGTGCGTAGTGAACCTTGGAGTTGTGGGGTGAAAAACCAAGATGGTTTTCGTAGATTTGCCTCTATGAAAGTGCCAGATACAAGAAATTCTTGGACCTATGGAAATATGACACTTGAGGATTGTAGGGTCAAATGCTTGGAAAATTGTTCTTGCATGGCTTATTCAAACTTGGACATAAGGGGAGGTGGGAGTGGTTGTTCCATTTGGTTTAGTGATCTTATTGATTTGAAATTGATTCAAGCAAGCCAGCAAGATTTATATATTCGAATGGCTATTCCAGCTTCAAATGAAGATACAAAAAAGAAGGCTTTAGTAATTACGATCCCAATTGTATCAGTCACCATTTTGCTACTCGTCGTCTTCTTTTATATTTACAAAGGCAGAAGAAAGCAAAGAGGAATAGAAGATGAAACAAATAACACCATATCAACTGAAAAGAAAGATGAAGACGAAGATCAAGATTTTGAGCTTCCTTTCTTTGATCTTGCTACAATATATAATGCTACCAATGGCTTCTCAAATGACAATAAGCTTGGAGAAGGTGGTTTTGGGCCAGTATATAAGGTACACATTGCTGTCAAAAGGCTTTCAAAGACTTCTAGACAAGGAATGAAAGAATTCAAGAATGAAGTTAGATTGTGTATCAAACTTCAACACCGAAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGAAGAGGAGAAAATGTTACTCTATGAATATATGCCCAACAAAAGCCTAGATTCATTTCTTTTTGATTCAACTCAAAGTAAACTTCTAGATTGGTCTACGCGGTTCCGCATCATGTGTGCAATTGCTCGTGGACTTCTTTATCTACACCAAGATTCTAGATTGAGGATCATACATAGAGATCTAAAAGCAAGCAACATTTTGTTAGACAATGATATGAATCCAAAAATTTCAGATTTTGGCTTAGCAAGACTTTGTGGAGATGATCAAATTGAAGGGAATACAAATAGAGTAGTTGGGACATATGGTTATATGGCACCAGAATATGCCATTGATGGGTTATTCTCCATAAAATCTGATGTATTCAGCTTTGGCATATTATTGCTAGAGATCATAAGCGGAAAGAAAAATAGAGGACTTACATACACAGGCGACGATGATTATAATCTTATTGGGCATGCATGGAGATTGTGGAAAAAAGGAAATCCAATAGAACTGATTGATGATTGTTTGGGGGACTCGTATGTTATATTAGAAGCCTTACGTTGCATACAAGTTGGTCTTTTATGTATACAACATCATCCATATGATAGACCTAACATGGCATCTGTGGTTGTTATGTTGACCAACGAAACTATTTTAGCTCAACCAAAGGAGCCTGATTTCTTATTAGAAAGGGTCATCCCTAGTGAAGTAGAATCTTCTCCTGGAAAGCAAATCTCTTCTTCAGTTAATGAAGTATCTATTTCACAATTGGATGCTAGATAA | 2496 | 0.3946 | MATHPLMLVITIFNLVMFFSQISTAIDTITQSQPLHDDGSTLVSNNGTFELGFFSPGGSSTNRYIGIWYKIIQVRTIVWVANRDNPIKNNTTTMLTIAKEGNLVLLNNNNNQTLWSTNITSSSTTNQPLLNPMVHLLDTGNLVHKEANNNNNDESFFLWQSFDHPCDTLLPGMKLGWDLKRGLNRKLVAWKSWDDPSSGNLSWGMVLSSNPELVLWNGSIEYHRSGPWNGPGFSGQPVLRITPIVDTKFVNNSNEVYYSYTLRNKSVISITYLNQTLSHRQRMTWLPENKTWRVYESVPRDSCDPYNPCGPNGNCMVNETPICQCLEGFEPKLPQNWNTFDWTQGCVRSEPWSCGVKNQDGFRRFASMKVPDTRNSWTYGNMTLEDCRVKCLENCSCMAYSNLDIRGGGSGCSIWFSDLIDLKLIQASQQDLYIRMAIPASNEDTKKKALVITIPIVSVTILLLVVFFYIYKGRRKQRGIEDETNNTISTEKKDEDEDQDFELPFFDLATIYNATNGFSNDNKLGEGGFGPVYKVHIAVKRLSKTSRQGMKEFKNEVRLCIKLQHRNLVKVLGCCIQEEEKMLLYEYMPNKSLDSFLFDSTQSKLLDWSTRFRIMCAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARLCGDDQIEGNTNRVVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIISGKKNRGLTYTGDDDYNLIGHAWRLWKKGNPIELIDDCLGDSYVILEALRCIQVGLLCIQHHPYDRPNMASVVVMLTNETILAQPKEPDFLLERVIPSEVESSPGKQISSSVNEVSISQLDAR | 831 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo11g00136 | 831 | CDD | B_lectin | 38 | 165 | IPR001480 | - | |
Pumo11g00136 | 831 | Pfam | Domain of unknown function (DUF3403) | 785 | 831 | IPR021820 | GO:0004674 | |
Pumo11g00136 | 831 | SUPERFAMILY | Protein kinase-like (PK-like) | 499 | 798 | IPR011009 | - | |
Pumo11g00136 | 831 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 588 | 792 | - | - | |
Pumo11g00136 | 831 | ProSiteProfiles | PAN/Apple domain profile. | 354 | 437 | IPR003609 | - | |
Pumo11g00136 | 831 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 22 | 162 | - | - | |
Pumo11g00136 | 831 | Gene3D | Transferase(Phosphotransferase) domain 1 | 588 | 795 | - | - | |
Pumo11g00136 | 831 | Pfam | PAN-like domain | 354 | 422 | IPR003609 | - | |
Pumo11g00136 | 831 | SMART | blect_4 | 32 | 165 | IPR001480 | - | |
Pumo11g00136 | 831 | Gene3D | Hepatocyte Growth Factor | 353 | 435 | - | - | |
Pumo11g00136 | 831 | MobiDBLite | consensus disorder prediction | 808 | 831 | - | - | |
Pumo11g00136 | 831 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 77 | 196 | IPR036426 | - | |
Pumo11g00136 | 831 | CDD | STKc_IRAK | 524 | 786 | - | - | |
Pumo11g00136 | 831 | Pfam | S-locus glycoprotein domain | 224 | 332 | IPR000858 | GO:0048544 | |
Pumo11g00136 | 831 | SMART | ntp_6 | 357 | 436 | IPR003609 | - | |
Pumo11g00136 | 831 | SMART | serkin_6 | 518 | 784 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo11g00136 | 831 | Pfam | D-mannose binding lectin | 76 | 191 | IPR001480 | - | |
Pumo11g00136 | 831 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 633 | 645 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo11g00136 | 831 | CDD | PAN_AP_plant | 353 | 437 | - | - | |
Pumo11g00136 | 831 | Gene3D | Phosphorylase Kinase; domain 1 | 479 | 587 | - | - | |
Pumo11g00136 | 831 | Gene3D | - | 20 | 162 | IPR036426 | - | |
Pumo11g00136 | 831 | Pfam | Protein tyrosine and serine/threonine kinase | 521 | 781 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo11g00136 | 831 | MobiDBLite | consensus disorder prediction | 810 | 831 | - | - | |
Pumo11g00136 | 831 | ProSiteProfiles | Protein kinase domain profile. | 518 | 789 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo11g00136 | 831 | ProSiteProfiles | Bulb-type lectin domain profile. | 26 | 157 | IPR001480 | - | |
Pumo11g00136 | 831 | ProSiteProfiles | EGF-like domain profile. | 299 | 335 | IPR000742 | - | |
Pumo11g00136 | 831 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 15 | 775 | - | - | |
Pumo11g00136 | 831 | PIRSF | SRK | 1 | 831 | IPR024171 | GO:0004674 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo11g00136 | Pumo-Chr11 | 3633753 | 3637205 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo11g00136 | 450 | 799 | Receptor kinase-like Gene Family | AT4G23190 | 51.667 | 2.45e-120 | 374 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pumo11g00136 | PK_Tyr_Ser-Thr | 2.4e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo11g00136 | - | - | tpra:123915417 | 1089.72 |