Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00096 ATGGACCTGAAGCCAAATCTTAACCCTGTCCTTACTGATGCCACACCCTTAACAAGGTCAAGGCTGGGTGTGCCTTCTGGTTTGTCACCTTACTCTCCTAAAGGGGCAACCTTTCCCCATGGTCCCATGCTGGCAATTCCAAGGAAGAAGACAGGAATTCTTGATGATGTTCGTTCTAGCGGTTGGCTCGATGCGATGAAATCATCTTCTCCTACTCACAATAAGGTATCCAAGGATGTTACTCATGGGATTGGATCACCTGATGCTGCTTATAGTACCTGGCTGCTAAAGTTTCCATCAGCACTTGCATCTTTTGATCAAATTACTAACTGTGCAAAAGGGAAGAGAATAGCATTGTTTCTGGATTATGATGGGACTCTTTCACCCATTGTGGACAATCCTGACTGTGCTTTCATGTCAGACAATATGCGTGCTGCTGTTAAAAAAGTGGCAGAATATTTTCCAACTGCAATAATCAGTGGAAGAAGCCGTGACAAGGTATATGAATTTGTTGGAGTAAGTGAGCTATATTATGCTGGTAGTCATGGTATGGACATTATTGGTCCTCCTAGACAATCTGTTTCTGATAATCACCCTGATGGCATCAGGTCTGCTGACATGCAGGGTGTTGAAGTTAATTTATTCCAACCTGCTGCTGAATTCCTGCCCGTGATTGATGAGGTACGTGGGTTGCTCAAGGAATGTACAAAAGATATTAAAGGAGCAACAGTTGAGAACAATAAATTTTGTGTATCTGTACATTACCGCAATGTAGACGAGGAGAGTTGGCAAATTGTGGGACAGCGTGTATATGATGTTCTGAAGGATTATCCACGTTTGCGTTTAACTCATGGGCGCAAGGTTTTAGAGGTTCGGCCAGTGATTGACTGGGATAAGGGAAAAGCTGTCACATTTTTACTTGAGTCACTTGGACTTAACAATTGTGATGACGTGCTAGCTATATATGTTGGAGATGATAGAACCGATGAAGATGCATTCAAGGTTTTGGGAGAAGTTAATAAAGGTTGTGGCATCTTAGTGTCCTCTGCCCCAAAAGAAAGCAACGCAATTTACTCTCTTCGTGATCCCTCTGAGGTCATGGAATTTCTGACATCACTTGCAGTATGGAAATCAAGCATTCAAGCTCGCTGA 1152 0.4288 MDLKPNLNPVLTDATPLTRSRLGVPSGLSPYSPKGATFPHGPMLAIPRKKTGILDDVRSSGWLDAMKSSSPTHNKVSKDVTHGIGSPDAAYSTWLLKFPSALASFDQITNCAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAEYFPTAIISGRSRDKVYEFVGVSELYYAGSHGMDIIGPPRQSVSDNHPDGIRSADMQGVEVNLFQPAAEFLPVIDEVRGLLKECTKDIKGATVENNKFCVSVHYRNVDEESWQIVGQRVYDVLKDYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLNNCDDVLAIYVGDDRTDEDAFKVLGEVNKGCGILVSSAPKESNAIYSLRDPSEVMEFLTSLAVWKSSIQAR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00096 383 Pfam Trehalose-phosphatase 120 364 IPR003337 GO:0003824|GO:0005992
Pumo11g00096 383 NCBIfam HAD-IIB family hydrolase 119 337 IPR006379 -
Pumo11g00096 383 CDD HAD_TPP 118 368 - -
Pumo11g00096 383 FunFam Trehalose 6-phosphate phosphatase 224 383 - -
Pumo11g00096 383 FunFam Trehalose 6-phosphate phosphatase 117 205 - -
Pumo11g00096 383 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 381 IPR044651 GO:0004805|GO:0005992
Pumo11g00096 383 Gene3D - 117 207 IPR023214 -
Pumo11g00096 383 Gene3D - 215 382 IPR023214 -
Pumo11g00096 383 SUPERFAMILY HAD-like 118 375 IPR036412 -
Pumo11g00096 383 NCBIfam trehalose-phosphatase 114 374 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00096 Pumo-Chr11 3033384 3039142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00096 104 379 Trehalose Biosynthesis Gene Families AT1G23870 24.662 5.46e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00096 K01087 - gmx:100783008 731.095