Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00091 ATGGAAACCCTTATTAGAAAAACATTCCTCACACTCCTATTTTTATCTTCAATTTTCTCAATAGCCTCATCAAGAAGAGGACCAGCACCATCCAGCAACATAGATTGGTGGTGCAACCTAACCCCACACCCTGAACCATGCAAACACTACATCACTACTGCTCAAATAAAGAGCCACCATTTGACAATCAAGCACAAAACTATCTTCCGGGGAATGCTTGTTCAACTTGCCTTAAACCAAGCACTCATCATGCAAAAAGAAGCACATGACTCTGACCAAAACAACATGCCAACAAATCATAGAACCGTACATAGTGATTGTTTGAAGCTCTATGGAAAAACCATCTTCCACCTCAACCGCACCCTTGAATGCTTTTATGGGAAGAAAAACTGTTCATCAGTTGATGCACAAACATGGCTCAGCACTGCCTTCACAAACATTCAAACGTGTCAAACTGGCATGGTTGAACTTGGTGTTGAAGATTTCAAGGTTCCCAACAACAATGTTTCTGAGATGATAAGGAACAGCTTGGCCATCAACATGGACTTCATGAAACATCATGATAAAAAGGAAGAGAAAGCAGAAGATGAATTTCCAAGTTGGTTTTCAACGCATGAGAGGAAACTGTTGCAGTCTTCAACGGTAAAGGCACAGGTTGTGGTGGCGAAAGATGGTTCTGGGAATTTCAAGACAGTGCAAGATGCTCTGAATGCTGCGGCAAAGAGGAAAGTGAAGAATAGGTTTGTGATACATGTGAAGAAAGGAGTGTATAGAGAGAATATTGAGGTTGCTATGCACAATGATAAGGTCATGCTAGTTGGTGATGGGTTGAGAAATACCATAATCTCGAGTAGCAGAAGTGTTCAAGATGGTTATACCACTTATAGTTCTGCAACTGCTGGCATAGATGGCCTTCACTTCATCGCACGTGACATCACCTTCCAAAACACTGCCGGTCCTCAAAAGGGTCAGGCCGTGGCACTCCGGTCGGCCTCGGACCTCTCCGTCTTCTACCGGTGCTCCATCATGGGTTACCAAGACACCCTCATGGCTCATTCACAGCGCCAATTTTACCGGCAATGCTACATCTATGGCACCGTTGACTTTATCTTTGGCAATGCAGCAGTAGTGTTCCAAAATTGTTACATTTTTGCAAGAAAACCTTTAGAGGGCCAAGCCAACATGATCACGGCCCAAGGACGAGGTGACCCATTCCAAAACACCGGAATTTCGATCCACAACTCTCAAATCCGGGCCGCGCCAGACCTTAAGCCCGTTGTTGACAAATACAACACTTTCTTGGGTAGGCCTTGGCAACAATACTCTAGAGTTGTGGTCATGAAAACATTCATGGACTCCTTGGTGAACCCATTAGGTTGGTCTCCATGGGGTGATTCTAATTTTGCTCAAGACACACTTTACTATGGAGAGTACCAAAACTATGGGCCTGGAGCATCTACAACCAATAGAGTAAAATGGCCTGGTTTTCATGTGATTACAAGCCCAGCTGAAGCGTCACAGTTTACAGTCAAGCGCCTTCTTGCTGGCCCAACATGGTTGGGTTCTACAACCGTGCCATTTACTTCTGGTCTTTGA 1596 0.4449 METLIRKTFLTLLFLSSIFSIASSRRGPAPSSNIDWWCNLTPHPEPCKHYITTAQIKSHHLTIKHKTIFRGMLVQLALNQALIMQKEAHDSDQNNMPTNHRTVHSDCLKLYGKTIFHLNRTLECFYGKKNCSSVDAQTWLSTAFTNIQTCQTGMVELGVEDFKVPNNNVSEMIRNSLAINMDFMKHHDKKEEKAEDEFPSWFSTHERKLLQSSTVKAQVVVAKDGSGNFKTVQDALNAAAKRKVKNRFVIHVKKGVYRENIEVAMHNDKVMLVGDGLRNTIISSSRSVQDGYTTYSSATAGIDGLHFIARDITFQNTAGPQKGQAVALRSASDLSVFYRCSIMGYQDTLMAHSQRQFYRQCYIYGTVDFIFGNAAVVFQNCYIFARKPLEGQANMITAQGRGDPFQNTGISIHNSQIRAAPDLKPVVDKYNTFLGRPWQQYSRVVVMKTFMDSLVNPLGWSPWGDSNFAQDTLYYGEYQNYGPGASTTNRVKWPGFHVITSPAEASQFTVKRLLAGPTWLGSTTVPFTSGL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00091 531 SUPERFAMILY Pectin lyase-like 213 530 IPR011050 -
Pumo11g00091 531 ProSitePatterns Pectinesterase signature 2. 363 372 IPR033131 -
Pumo11g00091 531 Gene3D - 211 531 IPR012334 -
Pumo11g00091 531 FunFam Pectinesterase 212 531 - -
Pumo11g00091 531 SMART PMEI_2 29 179 IPR006501 GO:0004857
Pumo11g00091 531 CDD PMEI-like_3 36 185 - -
Pumo11g00091 531 Pfam Plant invertase/pectin methylesterase inhibitor 33 179 IPR006501 GO:0004857
Pumo11g00091 531 PANTHER PECTINESTERASE 19 521 - -
Pumo11g00091 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 183 IPR035513 -
Pumo11g00091 531 NCBIfam pectinesterase inhibitor domain 8 180 IPR006501 GO:0004857
Pumo11g00091 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 180 IPR035513 -
Pumo11g00091 531 Pfam Pectinesterase 218 516 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00091 Pumo-Chr11 2867561 2869909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00091 31 531 Carbohydrate Esterase AT5G51500 56.275 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00091 K01051 - gmx:100806133 940.643