Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00090 ATGGAAACCCTTGGAAAAACATTCCTCACACTCTTATTTTTATCTTCAATTTTCTCAATAGCTTCATCAAGAAGAGGACCAGCTTCATCCAGCAACATAGATTGGTGGTGCAACCTAACCCCACACCCTGAACCATGCAAACACTACATCACTACTACTCAAATGAAGAGCCACCATTTCACAATCAAGCACAAAACTATCTTCCGGGGAATGCTTGTTCAACATGCCTTAAACCAAGCACTCATCATGCAAAAAGAAGCACATGACTCTGACCAAAACAACACGGCAACAAAGAATCACAGAACCGTGCATGGTGATTGTTTGAAGCTCTATGGAAAAACCATCTTCCACCTCAACCGCACCCTTGAATGCTTTTATGGGAAGCAAAACTGTTCATCCATTGATGCACAAACATGGCTCAGCACTGCTCTCACAAACATTCAAACGTGTCAAACCGGCACGGTTGAACTTGGTGTTGAAGATTTCAAGGTTCCCAACAACAATGTTACTGAGATGATAAGGAACAGCTTGGCCATCAACATGGATTTCATGAAACATCATCATCGCAAGGAAGAGAAAACAGAAGATGCGTTTCCAAGTTGGTTTTCAAAGCATGAGAGGAAACTGTTGCAGTCTTCAACGATAAAGGCACATGTTGTGGTGGCCAAAGATGGTTCTGGGAATTTCAAGACAGTGCAAGATGCTCTGAATGATGCGGCAAAGAGGAAAGTGAAGACGAGATTTGTGATACACGTGAAGAAAGGAGTGTATAGAGAGAATATTGAGGTTGCTGTGCACAATGATAACATCATGCTGGTTGGTGATGGGTTGAGAAATACCGTAATCACGAGTGGCAGAAGTGTTCAAGATGGTTATACCACCTATAGCTCTGCAACTGCTGGCATAGATGGCCTTCACTTCATCGCACGTGACATCACCTTCCAAAACACTGCCGGTCCTCAAAAGGGTCAAGCCGTGGCGCTCCGATCGGCCTCAGACCTCTCAGTCTTCTACCGGTGCTCCATCATGGGTTACCAAGACACCCTCATGGCTCATTCACAGCGCCAATTTTACCGACAATGCTACATCTATGGCACCGTTGACTTCATCTTTGGCAATGCTGCAGTAGTGTTCCAAAATTGTTACATTTTCGCAAGGAAACCCTTAGAGGGCCAAGCCAACATGATCACGGCCCAAGGCCGAGGCGACCCATTCCAAAACACTGGAATTTCAATCCACAACTCTCAAATTCGGGCCGCACCCGACCTCAAGCCCGTTGTTGACAAATACAACACTTTCTTGGGTAGGCCTTGGCAACAATACTCTAGAGTTGTGGTCATGAAAACTTTCATGGACACCTTGGTGAACCCATTGGGTTGGTCTCCATGGGGTGATTCTGATTTTGCTCAAGACACACTTTATTATGGAGAGTATCAAAATTATGGGCCTGGAGCATCTACAACCAATAGAGTAAAATGGCCTGGTTTTCATGTGATTACTAGTGCAACTGAAGCGTCGCAGTTTACAGTCACGCGCCTCCTTGCTGGCCCAACATGGTTGGGTTCTACAGCTGTGCCATTTACCTCTGGTCTTTGA 1596 0.453 METLGKTFLTLLFLSSIFSIASSRRGPASSSNIDWWCNLTPHPEPCKHYITTTQMKSHHFTIKHKTIFRGMLVQHALNQALIMQKEAHDSDQNNTATKNHRTVHGDCLKLYGKTIFHLNRTLECFYGKQNCSSIDAQTWLSTALTNIQTCQTGTVELGVEDFKVPNNNVTEMIRNSLAINMDFMKHHHRKEEKTEDAFPSWFSKHERKLLQSSTIKAHVVVAKDGSGNFKTVQDALNDAAKRKVKTRFVIHVKKGVYRENIEVAVHNDNIMLVGDGLRNTVITSGRSVQDGYTTYSSATAGIDGLHFIARDITFQNTAGPQKGQAVALRSASDLSVFYRCSIMGYQDTLMAHSQRQFYRQCYIYGTVDFIFGNAAVVFQNCYIFARKPLEGQANMITAQGRGDPFQNTGISIHNSQIRAAPDLKPVVDKYNTFLGRPWQQYSRVVVMKTFMDTLVNPLGWSPWGDSDFAQDTLYYGEYQNYGPGASTTNRVKWPGFHVITSATEASQFTVTRLLAGPTWLGSTAVPFTSGL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00090 531 PANTHER PECTINESTERASE 18 521 - -
Pumo11g00090 531 Pfam Pectinesterase 218 516 IPR000070 GO:0030599|GO:0042545
Pumo11g00090 531 Pfam Plant invertase/pectin methylesterase inhibitor 32 179 IPR006501 GO:0004857
Pumo11g00090 531 CDD PMEI-like_3 35 185 - -
Pumo11g00090 531 ProSitePatterns Pectinesterase signature 2. 363 372 IPR033131 -
Pumo11g00090 531 NCBIfam pectinesterase inhibitor domain 7 180 IPR006501 GO:0004857
Pumo11g00090 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 180 IPR035513 -
Pumo11g00090 531 Gene3D - 211 531 IPR012334 -
Pumo11g00090 531 SMART PMEI_2 28 179 IPR006501 GO:0004857
Pumo11g00090 531 FunFam Pectinesterase 212 531 - -
Pumo11g00090 531 SUPERFAMILY Pectin lyase-like 213 530 IPR011050 -
Pumo11g00090 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00090 Pumo-Chr11 2851162 2859543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00090 28 531 Carbohydrate Esterase AT5G51500 57.004 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00090 K01051 - gmx:100806133 984.171