Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00088 ATGGGACATTTGGATGGTGTTGATAGAAAGCTTCAGATTAGCAACATAAAGACATGGGTGAGTGCTTCTATCACCGATGACCAAACGTGCTCAGATGGGTTTGATGAGATGAACGTGGATTCCTCTTTGACGGACAAAATCAGAAAGATTGTTTTGGATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTCATCAACAACAATGTATACTAA 213 0.3991 MGHLDGVDRKLQISNIKTWVSASITDDQTCSDGFDEMNVDSSLTDKIRKIVLDVARKTSNALYFINNNVY 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00088 70 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 68 IPR035513 -
Pumo11g00088 70 Pfam Plant invertase/pectin methylesterase inhibitor 10 62 IPR006501 GO:0004857
Pumo11g00088 70 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 67 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00088 Pumo-Chr11 2841776 2841988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00088 14 62 Carbohydrate Esterase AT5G53370 36.000 5.31e-06 40.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00088 - - gmx:100527443 138.658